Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025149.1-P | Field mustard | cytosol | 99.38 | 99.38 |
| CDY51605 | Canola | cytosol | 98.77 | 98.77 |
| CDY04172 | Canola | cytosol | 96.3 | 96.89 |
| CDY59874 | Canola | cytosol | 94.44 | 95.03 |
| AT3G25600.1 | Thale cress | cytosol | 93.83 | 94.41 |
| KRH07628 | Soybean | cytosol | 77.78 | 78.75 |
| Solyc01g010020.2.1 | Tomato | cytosol | 75.31 | 75.78 |
| PGSC0003DMT400041342 | Potato | cytosol, mitochondrion | 75.31 | 75.78 |
| VIT_01s0011g02470.t01 | Wine grape | cytosol | 75.31 | 75.31 |
| CDY26151 | Canola | cytosol | 72.84 | 75.16 |
| CDY19221 | Canola | cytosol | 72.22 | 74.52 |
| CDX81878 | Canola | cytosol | 68.52 | 71.15 |
| CDY21702 | Canola | cytosol | 68.52 | 71.15 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 69.75 | 69.33 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 67.9 | 67.48 |
| PGSC0003DMT400019291 | Potato | cytosol | 47.53 | 66.38 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 64.81 | 64.02 |
| Zm00001d053188_P001 | Maize | cytosol | 41.36 | 61.47 |
| TraesCS1A01G416100.1 | Wheat | cytosol | 63.58 | 59.88 |
| TraesCS1B01G446400.1 | Wheat | plastid | 63.58 | 58.86 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 62.35 | 58.38 |
| Zm00001d039110_P001 | Maize | cytosol | 61.11 | 57.56 |
| EES19997 | Sorghum | plastid | 61.11 | 53.23 |
| CDY61824 | Canola | cytosol | 48.15 | 46.99 |
| CDY54677 | Canola | cytosol | 48.15 | 46.99 |
| CDY58544 | Canola | cytosol | 48.15 | 46.15 |
| EES03239 | Sorghum | plastid | 60.49 | 41.53 |
| Zm00001d044411_P001 | Maize | plastid | 59.88 | 41.45 |
| CDX92401 | Canola | cytosol | 32.72 | 39.55 |
| Os01t0604500-01 | Rice | cytosol | 60.49 | 39.36 |
| CDX96148 | Canola | cytosol | 35.8 | 38.93 |
| CDX99690 | Canola | cytosol | 35.8 | 38.93 |
| CDY55678 | Canola | cytosol | 35.8 | 38.93 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 58.64 | 38.46 |
| CDY65072 | Canola | cytosol | 35.19 | 38.26 |
| CDY04474 | Canola | cytosol | 35.19 | 38.26 |
| CDY56411 | Canola | cytosol | 35.19 | 38.26 |
| CDY27651 | Canola | cytosol | 35.19 | 38.0 |
| CDY12321 | Canola | cytosol | 33.95 | 37.93 |
| TraesCS3B01G246100.1 | Wheat | cytosol | 58.64 | 37.25 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 58.02 | 36.86 |
| TraesCS3A01G216300.1 | Wheat | cytosol | 57.41 | 36.47 |
| CDX92965 | Canola | cytosol | 34.57 | 36.36 |
| CDY10686 | Canola | cytosol | 34.57 | 36.13 |
| CDY34215 | Canola | cytosol | 34.57 | 35.9 |
| CDY06478 | Canola | cytosol | 32.72 | 35.1 |
| CDY10325 | Canola | cytosol | 24.07 | 34.51 |
| CDX94883 | Canola | cytosol | 23.46 | 34.23 |
| CDX75970 | Canola | cytosol | 22.84 | 32.46 |
| CDY48191 | Canola | cytosol | 35.8 | 32.4 |
| CDX77060 | Canola | cytosol | 35.8 | 32.22 |
| CDY40824 | Canola | cytosol | 34.57 | 31.11 |
| CDY57144 | Canola | cytosol | 25.93 | 28.77 |
| CDY30947 | Canola | cytosol | 35.8 | 27.75 |
| CDY21220 | Canola | cytosol | 35.19 | 25.79 |
| CDY26556 | Canola | cytosol | 23.46 | 25.68 |
| CDY21044 | Canola | cytosol | 23.46 | 25.68 |
| CDY30070 | Canola | cytosol | 23.46 | 25.68 |
| CDY31259 | Canola | cytosol | 23.46 | 25.68 |
| CDX98074 | Canola | cytosol | 23.46 | 25.68 |
| CDY15991 | Canola | cytosol | 23.46 | 25.68 |
| CDX75623 | Canola | extracellular | 27.78 | 25.0 |
| CDX83123 | Canola | golgi | 26.54 | 22.51 |
| CDY62753 | Canola | cytosol | 26.54 | 21.5 |
Protein Annotations
| EnsemblPlants:CDY48076 | EnsemblPlantsGene:GSBRNA2T00088751001 | Gene3D:1.10.238.10 | GO:A0A078IDR4 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44256 |
| PANTHER:PTHR44256:SF6 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:CDY48076 | ProteinID:CDY48076.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EEE2C8 | UniProt:A0A078IDR4 | MapMan:35.1 | : |
Description
BnaA06g33520DBnaA06g33520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDR4]
Coordinates
chrLK032752:+:94808..95296
Molecular Weight (calculated)
17639.0 Da
IEP (calculated)
4.212
GRAVY (calculated)
-0.115
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKATDQI KQLKDIFARF DMDGDGSLTH LELAALLRSL GIKPRGDQIS LLLNQIDRNG NGSVEFDELV VAIMPDLNEE VLINQEQLME VFRSFDRDGN
101: GQITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFAHIMAK SAADFLGLTA AA
101: GQITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFAHIMAK SAADFLGLTA AA
001: MASTKPTDQI KQLKDIFARF DMDKDGSLTQ LELAALLRSL GIKPRGDQIS LLLNQIDRNG NGSVEFDELV VAILPDINEE VLINQEQLME VFRSFDRDGN
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
Arabidopsis Description
CML16Probable calcium-binding protein CML16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.