Factsheet for Zm00001d053188_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044411_P001	Maize	plastid	99.08	46.15
EES03239	Sorghum	plastid	99.08	45.76
GSMUA_Achr8P29750_001	Banana	cytosol, mitochondrion	67.89	45.12
GSMUA_Achr1P25220_001	Banana	cytosol	63.3	42.33
AT1G18530.1	Thale cress	cytosol	60.55	42.04
GSMUA_Achr9P21860_001	Banana	cytosol, mitochondrion	62.39	41.72
CDX81878	Canola	cytosol	59.63	41.67
CDY21702	Canola	cytosol	59.63	41.67
Bra017355.1-P	Field mustard	cytosol	61.47	41.61
CDY04172	Canola	cytosol	61.47	41.61
CDY59874	Canola	cytosol	61.47	41.61
CDY51605	Canola	cytosol	61.47	41.36
VIT_01s0011g02470.t01	Wine grape	cytosol	61.47	41.36
CDY48076	Canola	cytosol	61.47	41.36
Bra025149.1-P	Field mustard	cytosol	61.47	41.36
Zm00001d039110_P001	Maize	cytosol	65.14	41.28
AT3G25600.1	Thale cress	cytosol	60.55	40.99
CDY26151	Canola	cytosol	58.72	40.76
Bra025896.1-P	Field mustard	cytosol	58.72	40.76
CDY19221	Canola	cytosol	57.8	40.13
VIT_17s0000g04460.t01	Wine grape	cytosol	58.72	40.0
PGSC0003DMT400063261	Potato	cytosol	58.72	39.75
HORVU3Hr1G052770.1	Barley	cytosol	89.91	39.68
KRH56721	Soybean	cytosol	57.8	39.13
Solyc01g010020.2.1	Tomato	cytosol	57.8	39.13
Os01t0604500-01	Rice	cytosol	88.99	38.96
PGSC0003DMT400041342	Potato	cytosol, mitochondrion	56.88	38.51
KRH07628	Soybean	cytosol	55.96	38.12
KRH62961	Soybean	cytosol	55.05	37.5
Solyc03g114420.1.1	Tomato	cytosol	58.72	37.43
TraesCS3B01G246100.1	Wheat	cytosol	87.16	37.25
TraesCS3D01G217900.1	Wheat	cytosol	87.16	37.25
KRH54782	Soybean	cytosol	54.13	36.88
TraesCS3A01G216300.1	Wheat	cytosol	84.4	36.08
Zm00001d008278_P001	Maize	cytosol	38.53	33.07
Zm00001d047597_P001	Maize	cytosol	38.53	28.57
Zm00001d038545_P001	Maize	cytosol, mitochondrion	38.53	28.19
Zm00001d052415_P001	Maize	cytosol	37.61	25.95
Zm00001d038543_P004	Maize	plastid	38.53	24.85
Zm00001d033980_P001	Maize	cytosol	35.78	24.84
Zm00001d041430_P001	Maize	cytosol	34.86	22.49
Zm00001d005003_P002	Maize	cytosol	35.78	21.67
Zm00001d028948_P001	Maize	cytosol	38.53	21.32
Zm00001d043144_P001	Maize	plasma membrane	35.78	21.31
PGSC0003DMT400019291	Potato	cytosol	22.02	20.69
Zm00001d022160_P003	Maize	cytosol, mitochondrion	31.19	19.77
Zm00001d014271_P001	Maize	cytosol	31.19	18.99
Zm00001d010649_P001	Maize	extracellular	22.94	17.61
Zm00001d049665_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	19.27	14.19
Zm00001d035095_P001	Maize	cytosol, extracellular, mitochondrion	18.35	13.51

Protein Annotations

EnsemblPlants:Zm00001d053188_P001	EnsemblPlants:Zm00001d053188_T001	EnsemblPlantsGene:Zm00001d053188	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44256
PANTHER:PTHR44256:SF4	PFAM:PF13202	PFAM:PF13499	PFscan:PS50222	ProteinID:AQK58898.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000843E22D	UniProt:A0A1D6QMM1	MapMan:35.1	:

Description

Probable calcium-binding protein CML15

Coordinates

chr4:+:218975864..218976193

Molecular Weight (calculated)

11528.7 Da

IEP (calculated)

3.911

GRAVY (calculated)

0.267

Length

109 amino acids

Sequence
(BLAST)

001: MDADGNGTVE FDELSSLAPL LLGPCRPAVA VDHAQLAEAF RAFDRDGNGF ISAAELARSM ALMGHPICYV ELTDMMKEAD TDGDGVISFQ EFTAIMAKSA
101: VDFLGLAAL

Best Arabidopsis Sequence Match ( AT3G25600.1 )
(BLAST)

001: MASTKPTDQI KQLKDIFARF DMDKDGSLTQ LELAALLRSL GIKPRGDQIS LLLNQIDRNG NGSVEFDELV VAILPDINEE VLINQEQLME VFRSFDRDGN
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S

Arabidopsis Description

CML16Probable calcium-binding protein CML16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI84]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.