Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81878 | Canola | cytosol | 92.99 | 93.59 |
| CDY21702 | Canola | cytosol | 92.36 | 92.95 |
| CDY26151 | Canola | cytosol | 91.08 | 91.08 |
| CDY19221 | Canola | cytosol | 91.08 | 91.08 |
| Bra025896.1-P | Field mustard | cytosol | 91.08 | 91.08 |
| VIT_17s0000g04460.t01 | Wine grape | cytosol | 75.8 | 74.38 |
| KRH56721 | Soybean | cytosol | 74.52 | 72.67 |
| AT3G25600.1 | Thale cress | cytosol | 74.52 | 72.67 |
| KRH62961 | Soybean | cytosol | 71.97 | 70.62 |
| PGSC0003DMT400063261 | Potato | cytosol | 71.34 | 69.57 |
| Solyc03g114420.1.1 | Tomato | cytosol | 72.61 | 66.67 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 68.79 | 66.26 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 67.52 | 65.03 |
| KRH54782 | Soybean | cytosol | 66.24 | 65.0 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 66.24 | 63.41 |
| Zm00001d053188_P001 | Maize | cytosol | 42.04 | 60.55 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 63.06 | 57.23 |
| Zm00001d039110_P001 | Maize | cytosol | 61.15 | 55.81 |
| TraesCS1A01G416100.1 | Wheat | cytosol | 59.87 | 54.65 |
| TraesCS1B01G446400.1 | Wheat | plastid | 59.87 | 53.71 |
| EES19997 | Sorghum | plastid | 61.78 | 52.15 |
| AT3G03000.1 | Thale cress | cytosol | 50.96 | 48.48 |
| AT1G32250.1 | Thale cress | cytosol | 50.96 | 48.19 |
| EES03239 | Sorghum | plastid | 63.69 | 42.37 |
| Zm00001d044411_P001 | Maize | plastid | 63.06 | 42.31 |
| AT3G56800.1 | Thale cress | cytosol | 36.94 | 38.93 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 60.51 | 38.46 |
| Os01t0604500-01 | Rice | cytosol | 60.51 | 38.15 |
| AT4G14640.1 | Thale cress | cytosol | 36.31 | 37.75 |
| AT5G21274.1 | Thale cress | cytosol | 35.67 | 37.58 |
| TraesCS3A01G216300.1 | Wheat | cytosol | 60.51 | 37.25 |
| TraesCS3B01G246100.1 | Wheat | cytosol | 60.51 | 37.25 |
| AT1G66410.2 | Thale cress | cytosol | 37.58 | 37.11 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 59.24 | 36.47 |
| AT2G41110.2 | Thale cress | cytosol | 36.94 | 36.02 |
| AT5G37780.3 | Thale cress | cytosol | 37.58 | 33.71 |
| AT3G22930.1 | Thale cress | cytosol | 36.94 | 33.53 |
| AT2G27030.3 | Thale cress | cytosol | 36.94 | 32.04 |
| AT1G12310.1 | Thale cress | cytosol | 27.39 | 29.05 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 31.21 | 28.66 |
| AT1G62820.1 | Thale cress | cytosol | 26.11 | 27.7 |
| AT3G50360.1 | Thale cress | cytosol | 29.3 | 27.22 |
| AT3G43810.2 | Thale cress | cytosol | 36.31 | 26.64 |
| AT2G41090.1 | Thale cress | cytosol | 31.21 | 25.65 |
| AT2G41100.1 | Thale cress | cytosol | 33.76 | 16.36 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:838434 | ProteinID:AAF98421.1 | ProteinID:AEE29726.1 | ArrayExpress:AT1G18530 |
| EnsemblPlantsGene:AT1G18530 | RefSeq:AT1G18530 | TAIR:AT1G18530 | RefSeq:AT1G18530-TAIR-G | EnsemblPlants:AT1G18530.1 | TAIR:AT1G18530.1 |
| EMBL:DQ056456 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0008150 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_173288.1 | PFAM:PF13499 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007616 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR44256 | PANTHER:PTHR44256:SF5 |
| UniProt:Q9FZ75 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A5092 | SEG:seg | : |
Description
CML15Probable calcium-binding protein CML15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ75]
Coordinates
chr1:+:6376623..6377256
Molecular Weight (calculated)
17147.4 Da
IEP (calculated)
3.949
GRAVY (calculated)
0.009
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDQIRQLKD IFDRFDMDAD GSLTILELAA LLRSLGLKPS GDQIHVLLAS MDSNGNGFVE FDELVGTILP DLNEEVLINS EQLLEIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.