Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58544 | Canola | cytosol | 92.12 | 89.94 |
| Bra021379.1-P | Field mustard | cytosol | 92.12 | 89.94 |
| VIT_16s0039g01880.t01 | Wine grape | cytosol | 81.21 | 82.21 |
| Solyc03g097100.1.1 | Tomato | cytosol | 78.18 | 79.14 |
| PGSC0003DMT400038352 | Potato | cytosol | 78.18 | 79.14 |
| KRH25249 | Soybean | cytosol | 75.15 | 76.07 |
| KRH30413 | Soybean | cytosol | 72.73 | 75.47 |
| AT1G32250.1 | Thale cress | cytosol | 70.91 | 70.48 |
| AT1G18530.1 | Thale cress | cytosol | 48.48 | 50.96 |
| AT3G25600.1 | Thale cress | cytosol | 48.48 | 49.69 |
| AT3G56800.1 | Thale cress | cytosol | 40.61 | 44.97 |
| AT5G21274.1 | Thale cress | cytosol | 39.39 | 43.62 |
| AT1G66410.2 | Thale cress | cytosol | 40.61 | 42.14 |
| AT2G41110.2 | Thale cress | cytosol | 40.61 | 41.61 |
| AT4G14640.1 | Thale cress | cytosol | 37.58 | 41.06 |
| AT5G37780.3 | Thale cress | cytosol | 40.61 | 38.29 |
| AT3G22930.1 | Thale cress | cytosol | 39.39 | 37.57 |
| AT2G27030.3 | Thale cress | cytosol | 40.61 | 37.02 |
| AT1G12310.1 | Thale cress | cytosol | 30.3 | 33.78 |
| AT1G62820.1 | Thale cress | cytosol | 29.7 | 33.11 |
| AT3G43810.2 | Thale cress | cytosol | 40.0 | 30.84 |
| AT2G41090.1 | Thale cress | cytosol | 35.15 | 30.37 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 30.3 | 29.24 |
| AT3G50360.1 | Thale cress | cytosol | 28.48 | 27.81 |
| AT2G41100.1 | Thale cress | cytosol | 40.0 | 20.37 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:821161 | UniProt:A0A178V6U2 | ProteinID:AAF26959.1 | ProteinID:AEE73889.1 |
| ArrayExpress:AT3G03000 | EnsemblPlantsGene:AT3G03000 | RefSeq:AT3G03000 | TAIR:AT3G03000 | RefSeq:AT3G03000-TAIR-G | EnsemblPlants:AT3G03000.1 |
| TAIR:AT3G03000.1 | EMBL:AY045602 | EMBL:AY090328 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0000325 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0043269 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_186950.1 | ProteinID:OAP01937.1 | PFAM:PF13499 |
| PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR44256 | PANTHER:PTHR44256:SF1 |
| UniProt:Q9M8U1 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A8E00 | SEG:seg | : |
Description
CML18Probable calcium-binding protein CML18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8U1]
Coordinates
chr3:+:677240..678180
Molecular Weight (calculated)
18091.2 Da
IEP (calculated)
4.177
GRAVY (calculated)
-0.344
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCDGGKPAP AKLGDEQLAE LREIFRSFDQ NKDGSLTELE LGSLLRSLGL KPSQDQLDTL IQKADRNNNG LVEFSEFVAL VEPDLVKCPY TDDQLKAIFR
101: MFDRDGNGYI TAAELAHSMA KLGHALTAEE LTGMIKEADR DGDGCIDFQE FVQAITSAAF DNAWG
101: MFDRDGNGYI TAAELAHSMA KLGHALTAEE LTGMIKEADR DGDGCIDFQE FVQAITSAAF DNAWG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.