Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98074 | Canola | cytosol | 97.3 | 97.3 |
| CDY30070 | Canola | cytosol | 97.3 | 97.3 |
| Bra019756.1-P | Field mustard | cytosol | 95.95 | 95.95 |
| CDY26556 | Canola | cytosol | 94.59 | 94.59 |
| AT1G62820.1 | Thale cress | cytosol | 94.59 | 94.59 |
| CDY21044 | Canola | cytosol | 94.59 | 94.59 |
| Bra026976.1-P | Field mustard | cytosol | 94.59 | 94.59 |
| CDY31259 | Canola | cytosol | 94.59 | 94.59 |
| CDY15991 | Canola | cytosol | 93.92 | 93.92 |
| VIT_02s0241g00140.t01 | Wine grape | cytosol | 87.16 | 87.76 |
| PGSC0003DMT400070433 | Potato | cytosol | 87.16 | 87.76 |
| KRH77406 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 86.49 | 87.07 |
| KRH28027 | Soybean | cytosol, endoplasmic reticulum, nucleus | 86.49 | 87.07 |
| Solyc03g083520.2.1 | Tomato | cytosol, nucleus | 85.81 | 84.67 |
| Solyc11g072270.1.1 | Tomato | cytosol | 87.16 | 82.69 |
| Zm00001d035095_P001 | Maize | cytosol, extracellular, mitochondrion | 75.68 | 75.68 |
| OQU79799 | Sorghum | cytosol | 75.0 | 75.0 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 74.32 | 74.32 |
| Os08t0117400-01 | Rice | plasma membrane | 74.32 | 74.32 |
| TraesCS7A01G316100.1 | Wheat | cytosol, unclear | 74.32 | 74.32 |
| TraesCS7B01G217200.1 | Wheat | cytosol, plastid | 73.65 | 73.65 |
| KRH04023 | Soybean | cytosol | 72.97 | 73.47 |
| Zm00001d049665_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 72.97 | 72.97 |
| TraesCS7D01G313100.1 | Wheat | cytosol | 72.97 | 72.97 |
| HORVU7Hr1G075240.1 | Barley | cytosol, plastid | 74.32 | 56.41 |
| AT3G56800.1 | Thale cress | cytosol | 50.68 | 50.34 |
| AT5G21274.1 | Thale cress | cytosol | 50.0 | 49.66 |
| AT2G41110.2 | Thale cress | cytosol | 50.68 | 46.58 |
| AT1G66410.2 | Thale cress | cytosol | 49.32 | 45.91 |
| AT5G37780.3 | Thale cress | cytosol | 49.32 | 41.71 |
| AT2G27030.3 | Thale cress | cytosol | 50.68 | 41.44 |
| AT4G14640.1 | Thale cress | cytosol | 39.86 | 39.07 |
| AT3G43810.2 | Thale cress | cytosol | 49.32 | 34.11 |
| AT3G22930.1 | Thale cress | cytosol | 39.86 | 34.1 |
| AT3G03000.1 | Thale cress | cytosol | 33.78 | 30.3 |
| AT2G41090.1 | Thale cress | cytosol | 36.49 | 28.27 |
| AT1G18530.1 | Thale cress | cytosol | 29.05 | 27.39 |
| AT1G32250.1 | Thale cress | cytosol | 30.41 | 27.11 |
| AT3G50360.1 | Thale cress | cytosol | 29.73 | 26.04 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 29.73 | 25.73 |
| AT3G25600.1 | Thale cress | cytosol | 25.0 | 22.98 |
| AT2G41100.1 | Thale cress | cytosol | 39.86 | 18.21 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:837785 | UniProt:A0A178WE17 | ProteinID:AAF79658.1 | ProteinID:AEE28865.1 |
| ArrayExpress:AT1G12310 | EnsemblPlantsGene:AT1G12310 | RefSeq:AT1G12310 | TAIR:AT1G12310 | RefSeq:AT1G12310-TAIR-G | EnsemblPlants:AT1G12310.1 |
| TAIR:AT1G12310.1 | EMBL:AY045587 | EMBL:AY094026 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_172695.1 | ProteinID:OAP16660.1 | PFAM:PF13405 | PFAM:PF13499 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF214 | UniProt:Q94AZ4 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI000004B2E2 | EMBL:Z47401 | : | : | : |
Description
CML13Probable calcium-binding protein CML13 [Source:UniProtKB/Swiss-Prot;Acc:Q94AZ4]
Coordinates
chr1:-:4186653..4188233
Molecular Weight (calculated)
16517.7 Da
IEP (calculated)
4.539
GRAVY (calculated)
-0.339
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKDGLSDDQ VSSMKEAFML FDTDGDGKIA PSELGILMRS LGGNPTQAQL KSIIASENLS SPFDFNRFLD LMAKHLKTEP FDRQLRDAFK VLDKEGTGFV
101: AVADLRHILT SIGEKLEPNE FDEWIKEVDV GSDGKIRYED FIARMVAK
101: AVADLRHILT SIGEKLEPNE FDEWIKEVDV GSDGKIRYED FIARMVAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.