CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES12687

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12310.1	EES12687	AT5G62070.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035095_P001	Maize	cytosol, extracellular, mitochondrion	97.3	97.3
Zm00001d049665_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	94.59	94.59
Os08t0117400-01	Rice	plasma membrane	93.92	93.92
TraesCS7D01G313100.1	Wheat	cytosol	92.57	92.57
TraesCS7B01G217200.1	Wheat	cytosol, plastid	91.89	91.89
TraesCS7A01G316100.1	Wheat	cytosol, unclear	91.22	91.22
GSMUA_Achr3P26750_001	Banana	cytosol, plasma membrane	79.73	79.73
PGSC0003DMT400070433	Potato	cytosol	77.03	77.55
VIT_02s0241g00140.t01	Wine grape	cytosol	77.03	77.55
Solyc03g083520.2.1	Tomato	cytosol, nucleus	77.7	76.67
CDX98074	Canola	cytosol	76.35	76.35
CDY31259	Canola	cytosol	76.35	76.35
CDY30070	Canola	cytosol	76.35	76.35
CDY21044	Canola	cytosol	76.35	76.35
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	75.68	76.19
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	75.0	75.51
AT1G12310.1	Thale cress	cytosol	75.0	75.0
Bra019756.1-P	Field mustard	cytosol	75.0	75.0
CDY26556	Canola	cytosol	74.32	74.32
Bra026976.1-P	Field mustard	cytosol	74.32	74.32
CDY15991	Canola	cytosol	73.65	73.65
Solyc11g072270.1.1	Tomato	cytosol	76.35	72.44
AT1G62820.1	Thale cress	cytosol	71.62	71.62
HORVU7Hr1G075240.1	Barley	cytosol, plastid	92.57	70.26
KRH04023	Soybean	cytosol	62.16	62.59
EES01631	Sorghum	cytosol	50.0	40.22
KXG37587	Sorghum	cytosol	39.86	38.31
EER90981	Sorghum	cytosol	37.16	36.91
EES09201	Sorghum	cytosol	43.24	35.56
EES16322	Sorghum	cytosol	41.22	34.66
KXG36700	Sorghum	cytosol	29.05	25.0
OQU78227	Sorghum	cytosol	29.05	24.02
EES19997	Sorghum	plastid	28.38	22.58
OQU84270	Sorghum	cytosol, plastid	33.11	22.37
EES03239	Sorghum	plastid	27.03	16.95
KXG37588	Sorghum	mitochondrion, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:8068579	UniProt:A0A1Z5R892	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:OQU79799
ProteinID:OQU79799	ProteinID:OQU79799.1	PFAM:PF13405	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23050	PANTHER:PTHR23050:SF214	SMART:SM00054	EnsemblPlantsGene:SORBI_3007G019501	SUPFAM:SSF47473	UniParc:UPI0001A8798E
RefSeq:XP_002444936.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:1831091..1832144

Molecular Weight (calculated)

16601.7 Da

IEP (calculated)

4.653

GRAVY (calculated)

-0.392

Length

148 amino acids

Sequence
(BLAST)

001: MGGKDLTEDQ IASMREAFSL FDTDGDGKIA PSELGVLMRS LGGNPTQAQL RDIAAQEKLT APFDFPRFLE LMRAHLKPEP FDRPLRDAFR VLDKDGSGTV
101: SVADLRHVLT SIGEKLEAHE FDEWIREVDV APDGTIRYDD FIRRIVAK

Best Arabidopsis Sequence Match ( AT1G12310.1 )
(BLAST)

001: MGKDGLSDDQ VSSMKEAFML FDTDGDGKIA PSELGILMRS LGGNPTQAQL KSIIASENLS SPFDFNRFLD LMAKHLKTEP FDRQLRDAFK VLDKEGTGFV
101: AVADLRHILT SIGEKLEPNE FDEWIKEVDV GSDGKIRYED FIARMVAK

Arabidopsis Description

CML13Probable calcium-binding protein CML13 [Source:UniProtKB/Swiss-Prot;Acc:Q94AZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.