CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05647

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62070.1	EES05647	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002630_P002	Maize	mitochondrion	89.94	91.9
Os04t0569900-01	Rice	cytosol, mitochondrion	85.22	85.78
Zm00001d026084_P001	Maize	mitochondrion	89.29	84.07
HORVU0Hr1G005320.2	Barley	cytosol	65.1	83.52
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	82.23	83.12
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	81.8	83.04
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	56.96	60.73
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	53.1	57.81
VIT_02s0025g04120.t01	Wine grape	mitochondrion	53.96	51.01
Solyc08g080470.2.1	Tomato	plastid	49.68	46.49
KRH03972	Soybean	cytosol	44.33	46.31
KRH57246	Soybean	cytosol	44.11	46.29
PGSC0003DMT400007855	Potato	cytosol, plastid	48.61	45.4
Solyc08g007920.1.1	Tomato	cytosol	22.48	44.87
KRH77498	Soybean	cytosol, mitochondrion	37.69	44.44
Solyc08g007930.1.1	Tomato	cytosol	21.41	44.05
Bra005929.1-P	Field mustard	plastid	31.91	43.44
CDX78285	Canola	plastid	31.91	43.31
KRG91452	Soybean	cytosol	40.9	41.89
Bra009281.1-P	Field mustard	mitochondrion	31.48	41.53
CDX70019	Canola	cytosol, mitochondrion	31.48	41.53
CDX98994	Canola	mitochondrion	31.48	41.53
CDY41368	Canola	mitochondrion, plastid	37.05	41.19
KRH35361	Soybean	cytosol, mitochondrion	40.9	41.16
CDY41252	Canola	cytosol, mitochondrion	42.4	40.57
CDY53133	Canola	nucleus	42.18	40.53
KRH09113	Soybean	cytosol	41.33	40.46
CDX98787	Canola	mitochondrion	25.48	40.2
Bra019337.1-P	Field mustard	nucleus	40.26	39.92
Bra020822.1-P	Field mustard	mitochondrion, plastid	35.76	39.76
CDX76341	Canola	mitochondrion, plastid	35.76	39.76
CDX94150	Canola	nucleus	39.4	39.66
Bra013672.1-P	Field mustard	mitochondrion, nucleus	41.97	39.52
KRH38565	Soybean	cytosol	40.69	39.42
CDY00253	Canola	plastid	33.19	39.34
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	40.9	39.3
AT4G23060.1	Thale cress	mitochondrion, nucleus	40.69	39.26
CDX86928	Canola	mitochondrion, plastid	32.98	39.09
CDX98786	Canola	nucleus	39.61	38.95
CDX81042	Canola	plastid	32.12	38.76
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	39.4	38.66
Bra010055.1-P	Field mustard	plastid	33.19	38.27
AT5G62070.1	Thale cress	cytosol, plastid	32.76	37.97
CDY00251	Canola	plastid	33.4	37.96
VIT_16s0100g00620.t01	Wine grape	cytosol	26.77	37.54
PGSC0003DMT400014796	Potato	cytosol	28.27	36.67
KXG40135	Sorghum	cytosol, mitochondrion	30.84	34.62
AT5G07240.2	Thale cress	plastid	31.69	33.11
KXG21487	Sorghum	cytosol, mitochondrion	32.33	30.63
EER93770	Sorghum	cytosol, mitochondrion	31.48	30.0
OQU91764	Sorghum	mitochondrion, plastid	31.91	29.5
EES02320	Sorghum	mitochondrion	29.98	29.17
OQU79535	Sorghum	cytosol, mitochondrion	27.19	27.43
EER94844	Sorghum	cytosol	29.12	27.25
KXG22374	Sorghum	mitochondrion	22.91	26.82
KXG33342	Sorghum	mitochondrion	22.06	26.01
KXG30089	Sorghum	cytosol, mitochondrion, plastid	10.92	22.67
OQU93295	Sorghum	plastid	13.7	22.61
KXG22418	Sorghum	cytosol, plastid	24.41	19.69
KXG33252	Sorghum	cytosol	19.91	16.64
KXG30090	Sorghum	mitochondrion	10.71	16.23
EES11606	Sorghum	nucleus	20.56	10.84

Protein Annotations

EnsemblPlants:EES12687	EnsemblPlantsGene:SORBI_3006G183600	EntrezGene:8057603	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF52	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:EES12687	ProteinID:EES12687.1	RefSeq:XP_002448359.1	SEG:seg
SMART:SM00015	unigene:Sbi.12047	UniParc:UPI0001A876E5	UniProt:C5YE38	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr6:-:53863304..53866363

Molecular Weight (calculated)

50129.2 Da

IEP (calculated)

11.062

GRAVY (calculated)

-0.720

Length

467 amino acids

Sequence
(BLAST)

001: MGWAPRWLRG LLGGGKKSAE TKPVKEKKRW GFGKSFREKT PAPAPARPPT PPVQPTATPR RGYAAAPDEG DDEQSKRAIA VAAATAAVAE AAVAAAQAAA
101: AVVRLTSSGR CAPAAAAKRE EWAAVRIQAA FRGYLARRAL KALRGLVKLQ ALVRGNIVRR QAAETLRCMH ALVRVQARAR ACRAIRSQHV AAHPDPPTPE
201: KYDQAGAPRH GRSGSLKANA SKTPGGERLG RERSESCGRN WLDRWVEERY MDDEKNAKIL EVDTGNKPGR YASKRRGGGG GNHHHQSPCS TMTSDQNSRS
301: YATMPESPSK DSTTAQQSVP SPSSVGMAEA LSPLRMPVDI AELCDSPQFF SATSRPGSSR RGPFTPTKSE CSRSLFGGYS DYPNYMANTE SFRAKARSQS
401: APKQRPQYEK SSSLRKASAH AFATGPCAPP SAGAAAQRSS ASLHAKFTNK AYPGSGRLDR LGMPVRY

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.