CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039510_P001	Maize	cytosol, mitochondrion	88.33	88.15
Zm00001d008819_P001	Maize	mitochondrion	79.17	81.55
Os01t0190500-01	Rice	cytosol, mitochondrion	70.42	72.69
TraesCS3B01G127100.1	Wheat	cytosol	64.58	66.95
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	64.17	66.81
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	64.58	66.38
KXG21487	Sorghum	cytosol, mitochondrion	64.58	62.88
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	65.42	54.8
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	44.58	52.97
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	40.83	52.27
Solyc06g066430.2.1	Tomato	nucleus	42.08	51.53
GSMUA_Achr10P...	Banana	cytosol	47.08	51.25
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	43.12	50.99
VIT_11s0016g03030.t01	Wine grape	cytosol	46.04	50.8
KRH47199	Soybean	cytosol	41.25	50.0
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	41.67	49.75
KRH60203	Soybean	cytosol, mitochondrion	36.88	49.17
GSMUA_AchrUn_...	Banana	cytosol	38.75	49.08
KRH44268	Soybean	cytosol	41.04	49.01
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	38.33	48.81
CDY43103	Canola	cytosol	37.08	48.37
Bra001633.1-P	Field mustard	cytosol	36.88	47.45
Solyc12g008520.1.1	Tomato	cytosol	40.42	47.43
KRH74242	Soybean	cytosol, mitochondrion	41.46	47.38
CDX82400	Canola	cytosol	36.67	47.19
Bra022163.1-P	Field mustard	cytosol	37.92	47.03
CDX92076	Canola	cytosol	37.92	47.03
KRH48993	Soybean	plastid	9.17	46.81
AT3G16490.1	Thale cress	cytosol	37.92	46.79
CDY68636	Canola	cytosol	37.92	46.79
CDX75883	Canola	cytosol	36.46	46.67
Bra021181.1-P	Field mustard	cytosol	37.71	46.53
KRH41488	Soybean	cytosol, mitochondrion	42.08	46.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	35.0	45.53
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	37.92	45.5
CDY67178	Canola	cytosol, mitochondrion	36.67	45.36
PGSC0003DMT400042595	Potato	nucleus	14.17	44.74
KRH48992	Soybean	endoplasmic reticulum	30.42	43.2
PGSC0003DMT400000953	Potato	cytosol	31.88	42.03
CDY30233	Canola	mitochondrion	33.96	42.01
AT4G29150.1	Thale cress	mitochondrion	34.79	41.85
Bra024161.1-P	Field mustard	mitochondrion	33.75	41.75
CDY47784	Canola	mitochondrion	33.12	40.98
Bra014304.1-P	Field mustard	cytosol, mitochondrion	24.38	40.34
CDY46537	Canola	cytosol, mitochondrion	24.38	40.34
CDY53440	Canola	mitochondrion	24.17	40.0
AT1G51960.1	Thale cress	cytosol, mitochondrion	29.17	39.89
CDY45643	Canola	cytosol	25.62	37.73
Bra030407.1-P	Field mustard	cytosol	25.83	36.8
KRH23382	Soybean	cytosol	27.29	34.47
KRH09951	Soybean	cytosol	26.88	34.13
KXG40135	Sorghum	cytosol, mitochondrion	27.5	31.73
EES12687	Sorghum	cytosol, mitochondrion	29.17	29.98
KXG22374	Sorghum	mitochondrion	23.54	28.32
KXG33342	Sorghum	mitochondrion	22.92	27.78
EER93770	Sorghum	cytosol, mitochondrion	27.71	27.14
OQU91764	Sorghum	mitochondrion, plastid	28.12	26.73
EER94844	Sorghum	cytosol	25.42	24.45
OQU79535	Sorghum	cytosol, mitochondrion	21.67	22.46
OQU93295	Sorghum	plastid	12.08	20.49
KXG30089	Sorghum	cytosol, mitochondrion, plastid	9.17	19.56
KXG22418	Sorghum	cytosol, plastid	18.54	15.37
KXG30090	Sorghum	mitochondrion	8.75	13.64
KXG33252	Sorghum	cytosol	15.83	13.6
EES11606	Sorghum	nucleus	18.12	9.82

Protein Annotations

EnsemblPlants:EES02320	EnsemblPlantsGene:SORBI_3003G035400	EntrezGene:8078734	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF27
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:EES02320	ProteinID:EES02320.1	RefSeq:XP_002457200.1
SEG:seg	SMART:SM00015	UniParc:UPI0001A84F74	UniProt:C5XLZ4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr3:-:3244200..3246825

Molecular Weight (calculated)

50850.0 Da

IEP (calculated)

11.146

GRAVY (calculated)

-0.476

Length

480 amino acids

Sequence
(BLAST)

001: MGKAARWFRS LLGGGRKDQE RQRASPAPPP TADRKRWSFA RSSRDSAEAA AAATEGSVRG GAAAAGGNAA IARAAEAAWL KSLYDDTGRQ QSKHAIAVAA
101: ATAAAADAAV AAAQAAVEVV RLTSQGPVFG GGGGGGAVLD PRGRAGAAVK IQTAFRGFLA KKALRALKAL VKLQALVRGY LVRRQAAATL QSMQALVRAQ
201: ATVRAARGCR ALPSLPPLHH PAAFRPRFSL QERYADDTRS EHGVAAYSRR LSASIESASY GGGGYDRSPK IVEMDTARPR SRASSLRTED EWYAQSVSSP
301: LQPPCHHLPP RIAVPTSRHF PDYDWCAPEK PRPATAQCTP RFAPPTPAKS VCGGGGGNGG YYAHHLAAGS PNCPGYMSST QSSEAKSSSR SHSAPKQRPP
401: EQQQPSRKRV PLSEVVLEAR ASLGGVGVGM MHKPCNTRAA QPQEPFDFRA AVVSRFEQRA SDAAAAAERD RDVLFLQRRW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.