Factsheet for Zm00001d039510_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02320	Sorghum	mitochondrion	88.15	88.33
Zm00001d008819_P001	Maize	mitochondrion	78.79	81.33
Os01t0190500-01	Rice	cytosol, mitochondrion	70.69	73.12
TraesCS3B01G127100.1	Wheat	cytosol	64.24	66.74
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	64.66	66.6
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	63.83	66.59
Zm00001d037688_P001	Maize	mitochondrion	62.37	64.94
Zm00001d010366_P001	Maize	cytosol, mitochondrion	60.71	62.26
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	64.66	54.28
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	41.16	52.8
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	43.87	52.23
GSMUA_Achr10P...	Banana	cytosol	47.4	51.7
Solyc06g066430.2.1	Tomato	nucleus	40.96	50.26
KRH47199	Soybean	cytosol	41.16	50.0
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	41.79	49.51
KRH44268	Soybean	cytosol	41.16	49.25
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	40.96	49.01
GSMUA_AchrUn_...	Banana	cytosol	38.46	48.81
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	38.25	48.81
VIT_11s0016g03030.t01	Wine grape	cytosol	43.66	48.28
KRH60203	Soybean	cytosol, mitochondrion	35.55	47.5
CDY43103	Canola	cytosol	35.55	46.47
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	38.05	45.75
Bra001633.1-P	Field mustard	cytosol	35.34	45.58
KRH74242	Soybean	cytosol, mitochondrion	39.71	45.48
CDX82400	Canola	cytosol	35.14	45.31
AT3G16490.1	Thale cress	cytosol	36.59	45.24
KRH41488	Soybean	cytosol, mitochondrion	40.96	45.18
CDX75883	Canola	cytosol	35.14	45.07
Solyc12g008520.1.1	Tomato	cytosol	38.25	44.99
CDY68636	Canola	cytosol	36.17	44.73
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	34.3	44.72
CDX92076	Canola	cytosol	35.97	44.7
Bra022163.1-P	Field mustard	cytosol	35.97	44.7
Bra021181.1-P	Field mustard	cytosol	35.97	44.47
CDY67178	Canola	cytosol, mitochondrion	34.93	43.3
KRH48992	Soybean	endoplasmic reticulum	29.73	42.31
CDY30233	Canola	mitochondrion	33.06	40.98
AT4G29150.1	Thale cress	mitochondrion	33.89	40.85
Bra024161.1-P	Field mustard	mitochondrion	32.85	40.72
PGSC0003DMT400000953	Potato	cytosol	30.77	40.66
KRH48993	Soybean	plastid	7.9	40.43
PGSC0003DMT400042595	Potato	nucleus	12.68	40.13
CDY47784	Canola	mitochondrion	32.22	39.95
AT1G51960.1	Thale cress	cytosol, mitochondrion	28.27	38.75
CDY46537	Canola	cytosol, mitochondrion	23.08	38.28
Bra014304.1-P	Field mustard	cytosol, mitochondrion	23.08	38.28
CDY53440	Canola	mitochondrion	22.87	37.93
CDY45643	Canola	cytosol	24.74	36.5
Bra030407.1-P	Field mustard	cytosol	24.95	35.61
KRH23382	Soybean	cytosol	26.82	33.95
Zm00001d048437_P002	Maize	mitochondrion	27.86	33.84
KRH09951	Soybean	cytosol	26.4	33.6
Zm00001d002630_P002	Maize	mitochondrion	30.35	31.95
Zm00001d010795_P001	Maize	cytosol, mitochondrion	21.21	31.29
Zm00001d026084_P001	Maize	mitochondrion	30.35	29.44
Zm00001d038793_P001	Maize	cytosol	22.25	28.16
Zm00001d012767_P001	Maize	cytosol, mitochondrion	19.13	28.13
Zm00001d033280_P001	Maize	cytosol, mitochondrion	27.23	27.7
Zm00001d032932_P001	Maize	mitochondrion	24.53	27.57
Zm00001d043510_P001	Maize	mitochondrion, nucleus	22.87	26.83
Zm00001d041437_P001	Maize	cytosol, mitochondrion	23.91	25.96
Zm00001d029197_P001	Maize	nucleus	24.95	25.21
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	21.83	20.87
Zm00001d048352_P001	Maize	mitochondrion	11.23	19.64
Zm00001d011138_P003	Maize	cytosol, plastid	17.88	14.55
Zm00001d038838_P001	Maize	mitochondrion	17.05	14.29
Zm00001d043655_P002	Maize	mitochondrion	16.42	13.74
Zm00001d001953_P003	Maize	nucleus	17.67	9.27
Zm00001d026535_P003	Maize	nucleus	17.05	9.1

Protein Annotations

EnsemblPlants:Zm00001d039510_P001	EnsemblPlants:Zm00001d039510_T001	EnsemblPlantsGene:Zm00001d039510	EntrezGene:103649639	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF27	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:ONM28984.1	SEG:seg
SMART:SM00015	UniParc:UPI0002214009	UniProt:A0A1D6MHS1	MapMan:35.2	:	:

Description

IQ-domain 25

Coordinates

chr3:-:6138823..6141058

Molecular Weight (calculated)

51583.1 Da

IEP (calculated)

11.312

GRAVY (calculated)

-0.524

Length

481 amino acids

Sequence
(BLAST)

001: MGKAARWLRG LLGGGRKDQE RRASPAPPTA DRKRWSFARS SRDSAEAAAA ATEGSVRGGG NAAIARAAEA AWLKSLYDDT GRQQSKHAIA VAAATAAAAD
101: AAVAAAQAAV EVVRLTSQGP VFGGGGPVPV LDPRGRAGAA VKIQTAFRRF LAKKALRALK ALVKLQALVR GYLVRRQAAA TLQSMQALVR AQAAVRAARY
201: SRALPALPPL HHHPPVRARF SLQERYGDDT RSEHGVAAYS RRLSASIESA SYGGGYDRSP KIVEMDTARP RSRASSLRTE DEWYAQSVSS PLLPPPPPPP
301: CQHLHQYHHL PPRIAVPTSR HFPDYDWCAP EKPRPATAQC TPRCAPPTPA RSVCGAGGNG GGYLAASPGC PGYMSSTRSS EAKSSSRSQS APKQRPLEQQ
401: EQQQQPARKR VPLSEVVLEA RASLGGAGVG MHKPCNTRAQ AQDAFDFRTA VVSRFDRRAS DAAAAAAERR DRELFFLQRR W

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.