Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46537 | Canola | cytosol, mitochondrion | 60.11 | 72.76 |
| Bra014304.1-P | Field mustard | cytosol, mitochondrion | 60.11 | 72.76 |
| CDY53440 | Canola | mitochondrion | 59.54 | 72.07 |
| CDY45643 | Canola | cytosol | 62.68 | 67.48 |
| Bra030407.1-P | Field mustard | cytosol | 62.68 | 65.28 |
| AT3G16490.1 | Thale cress | cytosol | 52.99 | 47.81 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 49.29 | 43.03 |
| KRH47199 | Soybean | cytosol | 47.01 | 41.67 |
| Solyc06g066430.2.1 | Tomato | nucleus | 46.44 | 41.58 |
| KRH44268 | Soybean | cytosol | 45.3 | 39.55 |
| PGSC0003DMT400042595 | Potato | nucleus | 15.67 | 36.18 |
| AT3G51380.1 | Thale cress | mitochondrion | 10.26 | 34.95 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 36.47 | 34.13 |
| AT4G29150.1 | Thale cress | mitochondrion | 37.89 | 33.33 |
| GSMUA_Achr10P... | Banana | cytosol | 41.31 | 32.88 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 42.45 | 32.82 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 42.45 | 32.82 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 43.3 | 32.69 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 42.17 | 32.6 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 37.61 | 32.51 |
| Os05t0187500-01 | Rice | cytosol | 42.73 | 31.91 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 33.9 | 31.57 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 35.9 | 31.19 |
| Zm00001d037688_P001 | Maize | mitochondrion | 41.03 | 31.17 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 41.03 | 30.7 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 39.6 | 30.15 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 41.88 | 29.82 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 31.34 | 29.81 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 39.32 | 29.81 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 33.9 | 29.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.91 | 29.55 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 39.32 | 29.55 |
| EES02320 | Sorghum | mitochondrion | 39.89 | 29.17 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 42.73 | 28.46 |
| Zm00001d008819_P001 | Maize | mitochondrion | 37.61 | 28.33 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 38.75 | 28.27 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 39.6 | 24.26 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 27.64 | 24.07 |
| AT5G07240.2 | Thale cress | plastid | 27.35 | 21.48 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 29.06 | 21.07 |
| AT4G14750.3 | Thale cress | cytosol | 25.93 | 19.78 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 22.51 | 19.55 |
| AT5G13460.1 | Thale cress | nucleus | 21.37 | 16.93 |
| AT1G18840.1 | Thale cress | cytosol | 21.65 | 13.29 |
| AT1G74690.1 | Thale cress | cytosol | 21.08 | 12.61 |
| AT1G14380.1 | Thale cress | cytosol | 19.09 | 10.09 |
| AT2G02790.1 | Thale cress | cytosol | 17.95 | 9.91 |
| AT1G19870.1 | Thale cress | nucleus | 19.09 | 8.44 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EntrezGene:841624 | ProteinID:AAD12670.1 | ProteinID:AEE32739.1 | ArrayExpress:AT1G51960 |
| EnsemblPlantsGene:AT1G51960 | RefSeq:AT1G51960 | TAIR:AT1G51960 | RefSeq:AT1G51960-TAIR-G | EnsemblPlants:AT1G51960.1 | TAIR:AT1G51960.1 |
| EMBL:DQ056492 | InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| InterPro:IPR000048 | Symbol:IQD27 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_175608.1 | InterPro:P-loop_NTPase | PFAM:PF00612 |
| PFAM:PF13178 | PO:PO:0000037 | PO:PO:0000056 | PO:PO:0000084 | PO:PO:0000146 | PO:PO:0004711 |
| PO:PO:0006325 | PO:PO:0006501 | PO:PO:0006502 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF10 |
| UniProt:Q9ZU28 | SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI00000A3D8A | SEG:seg | : |
Description
IQD27Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU28]
Coordinates
chr1:+:19310174..19311683
Molecular Weight (calculated)
39331.8 Da
IEP (calculated)
10.770
GRAVY (calculated)
-0.665
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAARWFKG MFGTKKSKDR SHVSGGDSVK GGDHSGDFNV PRDSVLLGTI LTDTEKDQNK NAIAVATATA TAADAAVSAA VVRLTSEGRA GDIIITKEER
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.