CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014304.1-P	Field mustard	cytosol, mitochondrion	100.0	100.0
CDY53440	Canola	mitochondrion	95.17	95.17
CDY45643	Canola	cytosol	73.79	65.64
AT1G51960.1	Thale cress	cytosol, mitochondrion	72.76	60.11
CDX75883	Canola	cytosol	52.07	40.27
CDY43103	Canola	cytosol	51.03	40.22
CDY68636	Canola	cytosol	52.76	39.33
CDX82400	Canola	cytosol	50.34	39.14
CDX92076	Canola	cytosol	52.07	39.02
CDY67178	Canola	cytosol, mitochondrion	51.38	38.4
CDX90650	Canola	mitochondrion	13.1	36.89
CDY29016	Canola	mitochondrion	12.76	35.92
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	48.97	35.32
Solyc06g066430.2.1	Tomato	nucleus	47.24	34.95
KRH47199	Soybean	cytosol	47.24	34.6
PGSC0003DMT400042595	Potato	nucleus	17.93	34.21
KRH44268	Soybean	cytosol	46.9	33.83
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	38.62	29.87
CDY47784	Canola	mitochondrion	39.31	29.38
CDY30233	Canola	mitochondrion	38.97	29.12
CDX73724	Canola	mitochondrion	12.76	28.46
CDY29768	Canola	cytosol	16.21	28.14
GSMUA_Achr10P...	Banana	cytosol	42.76	28.12
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	35.86	27.59
TraesCS1D01G123800.1	Wheat	cytosol	43.1	27.53
TraesCS1B01G142100.1	Wheat	cytosol	43.1	27.53
Os01t0190500-01	Rice	cytosol, mitochondrion	44.14	27.53
TraesCS1A01G122900.1	Wheat	cytosol, plastid	42.76	27.31
GSMUA_AchrUn_...	Banana	cytosol	35.52	27.18
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	37.93	27.09
CDX78285	Canola	plastid	32.07	27.03
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	42.76	26.9
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	36.9	26.75
Os05t0187500-01	Rice	cytosol	43.1	26.6
TraesCS3B01G127100.1	Wheat	cytosol	42.41	26.57
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	33.79	26.56
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	36.55	26.24
Zm00001d037688_P001	Maize	mitochondrion	41.72	26.19
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	42.07	26.12
CDX98994	Canola	mitochondrion	31.72	25.99
CDX70019	Canola	cytosol, mitochondrion	31.72	25.99
CDX78003	Canola	mitochondrion	13.1	25.0
KXG21487	Sorghum	cytosol, mitochondrion	42.07	24.75
Zm00001d010366_P001	Maize	cytosol, mitochondrion	40.0	24.73
EES02320	Sorghum	mitochondrion	40.34	24.38
Zm00001d008819_P001	Maize	mitochondrion	38.97	24.25
CDY00253	Canola	plastid	32.76	24.11
CDX81042	Canola	plastid	32.07	24.03
HORVU1Hr1G028250.6	Barley	mitochondrion	43.45	23.91
CDX86928	Canola	mitochondrion, plastid	32.41	23.86
CDY41423	Canola	cytosol, mitochondrion	23.45	23.21
CDX70272	Canola	cytosol, mitochondrion	23.45	23.21
CDY00251	Canola	plastid	32.76	23.11
Zm00001d039510_P001	Maize	cytosol, mitochondrion	38.28	23.08
CDY50677	Canola	nucleus	28.97	22.83
CDY36861	Canola	nucleus	28.97	22.46
CDY72577	Canola	cytosol, mitochondrion	21.72	21.72
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	42.76	21.64
CDY64325	Canola	cytosol	26.9	20.91
CDY04907	Canola	endoplasmic reticulum	23.45	20.3
CDY14162	Canola	endoplasmic reticulum	23.45	20.3
CDX85648	Canola	nucleus	26.21	19.24
CDX94150	Canola	nucleus	30.34	18.97
CDY41252	Canola	cytosol, mitochondrion	31.72	18.85
CDY53133	Canola	nucleus	31.38	18.72
CDX91120	Canola	nucleus	24.14	18.67
CDY41368	Canola	mitochondrion, plastid	26.55	18.33
CDX98786	Canola	nucleus	30.0	18.32
CDY41417	Canola	mitochondrion	18.62	18.06
CDX76341	Canola	mitochondrion, plastid	25.52	17.62
CDX78523	Canola	nucleus	26.55	17.26
CDX98787	Canola	mitochondrion	17.59	17.23
CDX70505	Canola	nucleus	26.21	17.04
CDX83805	Canola	cytosol, mitochondrion	24.14	12.54
CDY19251	Canola	cytosol, mitochondrion	23.45	12.14
CDY26720	Canola	cytosol, mitochondrion	23.1	11.88
CDY41676	Canola	cytosol, plastid	22.41	11.3
CDY67405	Canola	cytosol	22.41	11.23
CDY45197	Canola	nucleus, plastid	21.38	10.63
CDY03037	Canola	cytosol	21.03	10.55
CDX96693	Canola	nucleus	24.14	10.4
CDY04138	Canola	cytosol, plastid	20.0	10.34
CDY04137	Canola	cytosol, plastid	20.0	10.3
CDY17427	Canola	cytosol, plastid	19.31	9.88
CDY44186	Canola	nucleus, plastid	23.1	9.17
CDY49085	Canola	cytosol	19.31	9.14
CDY39317	Canola	cytosol	18.97	9.06
CDX83739	Canola	nucleus	22.76	8.93
CDY62588	Canola	nucleus	22.41	8.77
CDY29389	Canola	nucleus, plastid	22.41	8.69
CDX75112	Canola	cytosol	0.69	1.44

Protein Annotations

EnsemblPlants:CDY46537	EnsemblPlantsGene:GSBRNA2T00085750001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:CDY46537	ProteinID:CDY46537.1	SEG:seg	SMART:SM00015
SUPFAM:SSF52540	UniParc:UPI0002545DC3	UniProt:A0A078I903	MapMan:35.2	:	:

Description

BnaA08g01760DBnaA08g01760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I903]

Coordinates

chrLK032675:-:32315..33394

Molecular Weight (calculated)

32800.4 Da

IEP (calculated)

11.174

GRAVY (calculated)

-0.707

Length

290 amino acids

Sequence
(BLAST)

001: MGRATRWFKR LFSTKKSLDS DSEKEQNKQA IAVATTTATT AEAAVSAAKA AESVVTGDII TRDERWAAMK IQKVFRGSLA RKALRALKGI VKLQALVRGY
101: LVRKRAAVML HNMQTLVRVQ TVMRSKRNRR LNKEYNDMFQ PRHSLAEVAA GDALKRRSKS RKKHDVASMS EHKDGFVYQR NDLELNLPKE KWKFARTPRL
201: SSSLHSHSAN NRYYVMQSPG KSVCGNATCE YGMSTPGYME KTQSFKAKVR SHSAPHQRSE RMRLSLDEVI ASRSSVSGES LQQQPRYSCS

Best Arabidopsis Sequence Match ( AT1G51960.1 )
(BLAST)

001: MGRAARWFKG MFGTKKSKDR SHVSGGDSVK GGDHSGDFNV PRDSVLLGTI LTDTEKDQNK NAIAVATATA TAADAAVSAA VVRLTSEGRA GDIIITKEER
101: WAAVKIQKVF RGSLARKALR ALKGIVKLQA LVRGYLVRKR AAAMLQSIQT LIRVQTAMRS KRINRSLNKE YNNMFQPRQS FDKFDEATFD DRRTKIVEKD
201: DRYMRRSSSR SRSRQVHNVV SMSDYEGDFV YKGNDLELCF SDEKWKFATA QNTPRLLHHH SANNRYYVMQ SPAKSVGGKA LCDYESSVST PGYMEKTKSF
301: KAKVRSHSAP RQRSERQRLS LDEVMASKSS VSGVSMSHQH PPRHSCSCDP L

Arabidopsis Description

IQD27Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU28]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.