CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020822.1-P	Field mustard	mitochondrion, plastid	100.0	100.0
CDY41368	Canola	mitochondrion, plastid	94.05	94.05
CDY41252	Canola	cytosol, mitochondrion	78.81	67.83
CDY53133	Canola	nucleus	77.86	67.28
CDX94150	Canola	nucleus	73.57	66.59
CDX98787	Canola	mitochondrion	46.9	66.55
CDX98786	Canola	nucleus	74.76	66.11
CDX90650	Canola	mitochondrion	9.76	39.81
Solyc08g007920.1.1	Tomato	cytosol	22.14	39.74
Solyc08g007930.1.1	Tomato	cytosol	21.43	39.65
KRH03972	Soybean	cytosol	41.9	39.37
GSMUA_Achr8P11920_001	Banana	cytosol	33.57	39.28
CDY29016	Canola	mitochondrion	9.52	38.84
KRH57246	Soybean	cytosol	40.71	38.43
VIT_02s0025g04120.t01	Wine grape	mitochondrion	45.0	38.26
CDX75112	Canola	cytosol	12.38	37.41
KRH77498	Soybean	cytosol, mitochondrion	35.24	37.37
Os04t0569900-01	Rice	cytosol, mitochondrion	39.52	35.78
EES12687	Sorghum	cytosol, mitochondrion	39.76	35.76
Solyc08g080470.2.1	Tomato	plastid	42.38	35.67
PGSC0003DMT400007855	Potato	cytosol, plastid	42.38	35.6
PGSC0003DMT400014796	Potato	cytosol	30.48	35.56
Zm00001d002630_P002	Maize	mitochondrion	38.57	35.45
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	38.57	35.29
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	38.33	35.0
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	36.19	34.7
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	38.1	34.63
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	35.24	34.5
Zm00001d026084_P001	Maize	mitochondrion	39.05	33.06
CDX78285	Canola	plastid	26.9	32.85
CDX98994	Canola	mitochondrion	27.62	32.77
CDY00253	Canola	plastid	30.71	32.74
CDX70019	Canola	cytosol, mitochondrion	27.38	32.49
HORVU0Hr1G005320.2	Barley	cytosol	28.1	32.42
CDY29768	Canola	cytosol	12.86	32.34
CDX86928	Canola	mitochondrion, plastid	30.24	32.23
CDY00251	Canola	plastid	30.95	31.63
CDX73724	Canola	mitochondrion	9.76	31.54
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	30.95	30.73
CDX81042	Canola	plastid	26.9	29.2
CDX78003	Canola	mitochondrion	10.24	28.29
CDY43103	Canola	cytosol	24.76	28.26
CDX75883	Canola	cytosol	24.29	27.2
CDX92076	Canola	cytosol	25.0	27.13
CDX82400	Canola	cytosol	23.81	26.81
CDY67178	Canola	cytosol, mitochondrion	24.52	26.55
CDY68636	Canola	cytosol	24.52	26.48
CDY46537	Canola	cytosol, mitochondrion	17.62	25.52
CDY53440	Canola	mitochondrion	17.62	25.52
CDY50677	Canola	nucleus	21.67	24.73
CDY30233	Canola	mitochondrion	22.62	24.48
CDY36861	Canola	nucleus	21.67	24.33
CDY47784	Canola	mitochondrion	22.38	24.23
CDY41423	Canola	cytosol, mitochondrion	16.67	23.89
CDY64325	Canola	cytosol	21.19	23.86
CDY45643	Canola	cytosol	18.33	23.62
CDX70272	Canola	cytosol, mitochondrion	16.19	23.21
CDY72577	Canola	cytosol, mitochondrion	15.95	23.1
CDY14162	Canola	endoplasmic reticulum	16.9	21.19
CDY04907	Canola	endoplasmic reticulum	16.9	21.19
CDY41417	Canola	mitochondrion	14.05	19.73
CDX85648	Canola	nucleus	16.9	17.97
CDX91120	Canola	nucleus	15.24	17.07
CDX70505	Canola	nucleus	17.14	16.14
CDX78523	Canola	nucleus	17.14	16.14
CDY19251	Canola	cytosol, mitochondrion	16.67	12.5
CDY26720	Canola	cytosol, mitochondrion	16.43	12.23
CDX83805	Canola	cytosol, mitochondrion	15.95	12.01
CDY41676	Canola	cytosol, plastid	15.24	11.13
CDY67405	Canola	cytosol	15.0	10.88
CDY45197	Canola	nucleus, plastid	14.76	10.63
CDY04138	Canola	cytosol, plastid	14.05	10.52
CDY04137	Canola	cytosol, plastid	14.05	10.48
CDY03037	Canola	cytosol	14.05	10.21
CDY17427	Canola	cytosol, plastid	13.57	10.05
CDY49085	Canola	cytosol	14.52	9.95
CDX96693	Canola	nucleus	15.71	9.81
CDY39317	Canola	cytosol	13.81	9.56
CDX83739	Canola	nucleus	15.24	8.66
CDY62588	Canola	nucleus	15.0	8.5
CDY44186	Canola	nucleus, plastid	14.29	8.21
CDY29389	Canola	nucleus, plastid	14.29	8.02

Protein Annotations

EnsemblPlants:CDX76341	EnsemblPlantsGene:GSBRNA2T00126719001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:CDX76341	ProteinID:CDX76341.1	SEG:seg	SMART:SM00015
UniParc:UPI0002545FE4	MapMan:35.2	:	:	:	:

Description

BnaA08g10590D

Coordinates

chrLK031807:-:529141..531430

Molecular Weight (calculated)

46468.7 Da

IEP (calculated)

10.992

GRAVY (calculated)

-0.710

Length

420 amino acids

Sequence
(BLAST)

001: MRKASRWFRN LFGLNKPDPG YPDPSIVTPS RSFPKRRWSF VKSKREKGNA PPNHHPSPPP LRSSTPPPSY LQSSPSDGRR WKQKLVREEE GDKESDDQEV
101: ALAAATSIVA EAAVAAAAAV VRLTSTANFS SGFNDVVAHV SRFDRYRSGR DSLAAIKIQS TFRGYLAKRA LRALKGLVKL QAIVRGHIER KKMSVHLRRM
201: HALVRAQARV RARRVVVSSE SSSSKSNNTK SSHFQNPIDK GPTTPEKLEY SISSRSSKLG HSHLSKRNGS KARGNRPDIF YSSHLVLDNS GWSGPVYAMP
301: FSPSSSHEET VSQFCNAENS TQLYSATSIN KPSVFTTSSI APSESTKSCC YTDHPSYMAC TESSRARARS ASAPKSRPQL YHEQSLSKQF GDALQTSFMN
401: KAYPGSGRLN RLGMPIGYRY

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.