CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025777.1-P	Field mustard	nucleus, plastid	94.25	92.61
CDY29389	Canola	nucleus, plastid	94.66	92.51
CDX83739	Canola	nucleus	76.88	76.05
CDY62588	Canola	nucleus	77.02	75.98
AT1G19870.1	Thale cress	nucleus	76.74	70.65
VIT_18s0001g13870.t01	Wine grape	nucleus	38.17	35.23
Solyc04g081210.2.1	Tomato	nucleus	38.3	32.48
PGSC0003DMT400009545	Potato	nucleus	38.3	32.26
KRH51729	Soybean	cytosol	36.8	31.68
CDX90650	Canola	mitochondrion	4.38	31.07
CDY29016	Canola	mitochondrion	4.24	30.1
KRH61064	Soybean	nucleus	26.54	26.68
CDX73724	Canola	mitochondrion	4.38	24.62
TraesCS2A01G492300.1	Wheat	nucleus	28.32	24.04
CDY29768	Canola	cytosol	5.47	23.95
TraesCS2B01G520500.3	Wheat	nucleus	28.04	23.92
TraesCS2D01G492600.1	Wheat	nucleus	28.04	23.81
Os04t0663100-01	Rice	plasma membrane	28.86	23.63
EES11606	Sorghum	nucleus	28.32	23.36
CDY53440	Canola	mitochondrion	9.17	23.1
CDY46537	Canola	cytosol, mitochondrion	9.17	23.1
CDX78003	Canola	mitochondrion	4.65	22.37
Zm00001d026535_P003	Maize	nucleus	27.5	22.31
Zm00001d001953_P003	Maize	nucleus	26.81	21.37
CDY45643	Canola	cytosol	9.44	21.17
CDY50677	Canola	nucleus	9.85	19.57
CDX85648	Canola	nucleus	10.53	19.49
CDY68636	Canola	cytosol	10.26	19.28
CDY36861	Canola	nucleus	9.85	19.25
CDX98994	Canola	mitochondrion	9.3	19.21
CDX70019	Canola	cytosol, mitochondrion	9.17	18.93
CDX82400	Canola	cytosol	9.58	18.77
CDY41676	Canola	cytosol, plastid	14.64	18.61
CDY67178	Canola	cytosol, mitochondrion	9.85	18.56
CDY67405	Canola	cytosol	14.64	18.48
CDY04138	Canola	cytosol, plastid	14.09	18.36
CDY17427	Canola	cytosol, plastid	14.23	18.34
CDX78285	Canola	plastid	8.62	18.31
CDY43103	Canola	cytosol	9.17	18.21
CDX91120	Canola	nucleus	9.3	18.13
CDX75883	Canola	cytosol	9.3	18.13
CDY04137	Canola	cytosol, plastid	13.95	18.12
CDY30233	Canola	mitochondrion	9.58	18.04
CDX92076	Canola	cytosol	9.44	17.83
CDY00253	Canola	plastid	9.58	17.77
CDY47784	Canola	mitochondrion	9.3	17.53
CDX86928	Canola	mitochondrion, plastid	9.44	17.51
CDX78523	Canola	nucleus	10.67	17.49
CDX70505	Canola	nucleus	10.67	17.49
CDY03037	Canola	cytosol	13.82	17.47
CDX98787	Canola	mitochondrion	6.98	17.23
CDY00251	Canola	plastid	9.58	17.03
CDX83805	Canola	cytosol, mitochondrion	13.0	17.03
CDY45197	Canola	nucleus, plastid	13.54	16.98
CDY26720	Canola	cytosol, mitochondrion	12.86	16.67
CDY64325	Canola	cytosol	8.48	16.62
CDY72577	Canola	cytosol, mitochondrion	6.57	16.55
CDY19251	Canola	cytosol, mitochondrion	12.59	16.43
CDX81042	Canola	plastid	8.62	16.28
CDX70272	Canola	cytosol, mitochondrion	6.29	15.7
CDY41423	Canola	cytosol, mitochondrion	6.16	15.36
CDY49085	Canola	cytosol	12.86	15.33
CDY39317	Canola	cytosol	12.45	14.99
CDX98786	Canola	nucleus	9.71	14.95
CDX94150	Canola	nucleus	9.44	14.87
CDY41417	Canola	mitochondrion	6.02	14.72
CDY14162	Canola	endoplasmic reticulum	6.7	14.63
CDY04907	Canola	endoplasmic reticulum	6.7	14.63
CDY53133	Canola	nucleus	9.71	14.61
CDX96693	Canola	nucleus	13.41	14.56
CDY41252	Canola	cytosol, mitochondrion	9.71	14.55
CDY41368	Canola	mitochondrion, plastid	8.21	14.29
CDX76341	Canola	mitochondrion, plastid	8.21	14.29
CDX75112	Canola	cytosol	1.37	7.19

Protein Annotations

EnsemblPlants:CDY44186	EnsemblPlantsGene:GSBRNA2T00079665001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:CDY44186	ProteinID:CDY44186.1	SEG:seg	SMART:SM00015
UniParc:UPI0004EE28FF	UniProt:A0A078I2Y2	MapMan:35.1	:	:	:

Description

BnaC05g15430DBnaC05g15430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2Y2]

Coordinates

chrLK032582:-:6019..9370

Molecular Weight (calculated)

79566.5 Da

IEP (calculated)

5.636

GRAVY (calculated)

-0.882

Length

731 amino acids

Sequence
(BLAST)

001: MGRSPASSCL RIIACAGGDD ATEPTANKSS RGWSFRKKSG KNRGLITSVV SDTTPASRTR ETLESALLNS PSPDNNILSE KHAFSVDDDE KTKKSQLPVT
101: YVAEPVDEKK KQSAEDKTTE LPVLVESKGT ETEEDADAIL IEKDTTPEVE PEASEADDVM IITRKESDDK LDDSVIIIIQ AAVRGFLARK ELLRRKKVVK
201: LQAAFRGHLV RNQAMGSLRC VQAIVKMQTL VRARHSTKDG SRISAISDKA ETNAATQKLL ENKFAKHLME STPKTKPISI KCDPTKPSSA WSWLERWMSV
301: SNPEKTSKSD METEEQQLEG TKSSQADVVN SDSTLETEAE TGLSIKVAAH PVELSETEKM SQYDSPEASA EADRDLIQSH PLAAKDPEAL LEEDDQPKPS
401: LDRKASNPSF IAAQSKFEEL TASTGSSKAL VLSSKDGVLG EEGKTDKDPS EANTMSTKKD QSLEDVALGG SECGTELSVT SSLDSLDKKS DIESAEPKVE
501: SKLLENGTPK TDQAELIEID VKAETPLAIV EDRREDEVEV SVIQNESVIS TPDSKKRQAE DGTGLQALTP MSVTESQATP ASQASSSVRT RKEKSGKSGS
601: SQKRKVSKKI TSTPPKRETG NGEGKNVREQ EEGKEQKSGR RNSFGNDQEA RESSGGKNSL PRFMQPTQSA KLKVQEHNSP RSSPDLQERD VSVKKRHSLP
701: VGANGKQGSS PRIQRSASQA QPGAKERKWQ R

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.