Factsheet for Bra025777.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29389	Canola	nucleus, plastid	99.33	98.8
CDY44186	Canola	nucleus, plastid	92.61	94.25
Bra016490.1-P	Field mustard	nucleus	78.49	79.03
AT1G19870.1	Thale cress	nucleus	76.34	71.54
VIT_18s0001g13870.t01	Wine grape	nucleus	38.04	35.73
GSMUA_Achr1P19900_001	Banana	cytosol	10.08	32.19
KRH51729	Soybean	cytosol	36.42	31.92
Solyc04g081210.2.1	Tomato	nucleus	36.56	31.55
PGSC0003DMT400009545	Potato	nucleus	36.29	31.11
Bra012855.1-P	Field mustard	mitochondrion	4.3	31.07
GSMUA_Achr1P06080_001	Banana	nucleus	28.49	27.21
GSMUA_Achr3P11240_001	Banana	nucleus	27.96	26.63
KRH61064	Soybean	nucleus	25.27	25.86
TraesCS2A01G492300.1	Wheat	nucleus	28.09	24.27
GSMUA_Achr1P19910_001	Banana	nucleus	19.49	24.25
TraesCS2B01G520500.3	Wheat	nucleus	27.82	24.15
TraesCS2D01G492600.1	Wheat	nucleus	27.82	24.04
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	27.02	23.76
Os04t0663100-01	Rice	plasma membrane	28.49	23.74
EES11606	Sorghum	nucleus	27.55	23.14
Bra036812.1-P	Field mustard	mitochondrion	4.7	22.73
Bra014304.1-P	Field mustard	cytosol, mitochondrion	8.74	22.41
Zm00001d026535_P003	Maize	nucleus	26.88	22.2
Zm00001d001953_P003	Maize	nucleus	26.34	21.37
Bra030407.1-P	Field mustard	cytosol	9.27	20.47
Bra008163.1-P	Field mustard	cytosol	14.11	20.35
Bra023414.1-P	Field mustard	nucleus	10.35	19.49
Bra009281.1-P	Field mustard	mitochondrion	9.01	18.93
Bra039715.1-P	Field mustard	nucleus, plastid	9.41	18.92
Bra021181.1-P	Field mustard	cytosol	9.81	18.77
Bra001633.1-P	Field mustard	cytosol	9.14	18.23
Bra026581.1-P	Field mustard	cytosol	13.84	17.82
Bra005929.1-P	Field mustard	plastid	8.2	17.78
Bra017409.1-P	Field mustard	cytosol, plastid	13.17	17.35
Bra022163.1-P	Field mustard	cytosol	9.01	17.31
Bra024161.1-P	Field mustard	mitochondrion	9.01	17.27
Bra025690.1-P	Field mustard	cytosol, mitochondrion	12.9	17.02
Bra006201.1-P	Field mustard	nucleus	10.22	17.0
Bra010055.1-P	Field mustard	plastid	9.14	16.79
Bra036898.1-P	Field mustard	cytosol	8.2	16.67
Bra024806.1-P	Field mustard	cytosol, plastid	12.77	16.24
Bra028807.1-P	Field mustard	mitochondrion	7.8	15.26
Bra009498.1-P	Field mustard	cytosol, mitochondrion	7.66	14.92
Bra016536.1-P	Field mustard	nucleus	13.44	14.86
Bra019337.1-P	Field mustard	nucleus	9.01	14.23
Bra019653.1-P	Field mustard	cytosol	11.83	14.01
Bra020822.1-P	Field mustard	mitochondrion, plastid	7.66	13.57
Bra013672.1-P	Field mustard	mitochondrion, nucleus	8.87	13.31
HORVU2Hr1G124440.1	Barley	cytosol	0.81	9.84

Protein Annotations

EnsemblPlants:Bra025777.1	EnsemblPlants:Bra025777.1-P	EnsemblPlantsGene:Bra025777	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000253EEE4
UniProt:M4EAG9	MapMan:35.1	:	:	:	:

Description

AT1G19870 (E=5e-241) iqd32 | iqd32 (IQ-domain 32); calmodulin binding

Coordinates

chrA06:-:7922341..7925171

Molecular Weight (calculated)

80497.4 Da

IEP (calculated)

5.227

GRAVY (calculated)

-0.849

Length

744 amino acids

Sequence
(BLAST)

001: MGRSPASSCL RIIACAGGDD ATEPTANKSS RGWSFRKKSG KNRGLITTSV VSDTTPASRT RETLESALLN SPSPDNNILS EKHTFSVDDD EKKKSQLPVT
101: YVAEPVDEKK KQSAEDKTTE LPVLVESKGT ETEEDDLIGT ELEAKLDVAN AADATLIEKD TTPEVEPEAS EADEVIITNK QSDEEVDDSV IIIIQAAIRG
201: FLARKELLRR KKVVKLQAAF RGHLVRNQAM GSLRCVQAIV KMQTLVRARH STKDGSRVSA ISDKAETNAA TQKLLENKFA KHLMESTPKT KPISIKCDPT
301: KPSSAWSWLE RWMSVSNPEK TSKSDMETEE QQLEGTKSSQ VDVVNSDSTT LETEAETGLP SKVAAHHIEL SETEKMSQYD SPEASAEVDH DLIQSHPLAA
401: KDPEALLEED DQPKPSLKRK ASNPSFIAAQ SKFEELTAST GSSKAMVLSS KDGVLGEEGK TDIDPSEANT TSTKKDQSLE DVALGGSECG TELSVTSSLD
501: SLDKKSDIEG ADSKAESKLL ENGTPKTDQA ELIEIDVKAE TPLAIVEDRK EEDEVEVSVI QHESVISTPD SKKRPAEDGT GLQAVTPMSV TESQATPASQ
601: ASSSVKARKE KSGKSGSSQK RKVSKKITST PPKQETGNGE GKNVREQEEG KEQKSGRRNS FGNDQEARES SGGKNSLPRF MQPTQSAKLK VQEHNSPRSS
701: PDLQEREVSV KKRHSLPVGA NGKQGSSPRI QRSASQAQPG TKGK

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.