Factsheet for Bra013672.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41252	Canola	cytosol, mitochondrion	95.77	97.34
CDY53133	Canola	nucleus	93.15	95.06
Bra020822.1-P	Field mustard	mitochondrion, plastid	67.54	79.76
Bra019337.1-P	Field mustard	nucleus	75.6	79.62
GSMUA_Achr8P11920_001	Banana	cytosol	34.27	47.35
VIT_02s0025g04120.t01	Wine grape	mitochondrion	46.17	46.36
KRH03972	Soybean	cytosol	40.93	45.41
Bra012855.1-P	Field mustard	mitochondrion	9.27	44.66
KRH57246	Soybean	cytosol	39.72	44.27
KRH77498	Soybean	cytosol, mitochondrion	34.68	43.43
Os04t0569900-01	Rice	cytosol, mitochondrion	39.92	42.67
Solyc08g080470.2.1	Tomato	plastid	42.34	42.08
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	38.91	42.05
EES12687	Sorghum	cytosol, mitochondrion	39.52	41.97
Solyc08g007920.1.1	Tomato	cytosol	19.76	41.88
Bra009281.1-P	Field mustard	mitochondrion	29.84	41.81
Zm00001d002630_P002	Maize	mitochondrion	38.51	41.79
PGSC0003DMT400007855	Potato	cytosol, plastid	41.94	41.6
Bra005929.1-P	Field mustard	plastid	28.63	41.4
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	35.69	41.26
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	38.1	41.09
Solyc08g007930.1.1	Tomato	cytosol	18.75	40.97
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	35.89	40.64
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	37.7	40.48
Zm00001d026084_P001	Maize	mitochondrion	39.11	39.11
PGSC0003DMT400014796	Potato	cytosol	28.02	38.61
HORVU0Hr1G005320.2	Barley	cytosol	27.82	37.91
Bra010055.1-P	Field mustard	plastid	30.44	37.28
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	31.65	37.12
Bra022163.1-P	Field mustard	cytosol	26.61	34.11
Bra001633.1-P	Field mustard	cytosol	25.2	33.51
Bra021181.1-P	Field mustard	cytosol	25.6	32.65
Bra036812.1-P	Field mustard	mitochondrion	10.08	32.47
Bra014304.1-P	Field mustard	cytosol, mitochondrion	18.55	31.72
Bra024161.1-P	Field mustard	mitochondrion	22.98	29.38
Bra030407.1-P	Field mustard	cytosol	19.96	29.38
Bra039715.1-P	Field mustard	nucleus, plastid	21.17	28.38
Bra036898.1-P	Field mustard	cytosol	19.96	27.05
Bra009498.1-P	Field mustard	cytosol, mitochondrion	18.95	24.61
Bra028807.1-P	Field mustard	mitochondrion	18.75	24.47
Bra023414.1-P	Field mustard	nucleus	15.52	19.49
Bra006201.1-P	Field mustard	nucleus	15.73	17.45
Bra008163.1-P	Field mustard	cytosol	15.73	15.12
Bra025690.1-P	Field mustard	cytosol, mitochondrion	16.53	14.54
Bra026581.1-P	Field mustard	cytosol	15.73	13.49
Bra016536.1-P	Field mustard	nucleus	16.73	12.33
Bra024806.1-P	Field mustard	cytosol, plastid	14.11	11.97
Bra017409.1-P	Field mustard	cytosol, plastid	13.51	11.86
Bra019653.1-P	Field mustard	cytosol	13.91	10.99
Bra016490.1-P	Field mustard	nucleus	15.12	10.15
Bra025777.1-P	Field mustard	nucleus, plastid	13.31	8.87

Protein Annotations

EnsemblPlants:Bra013672.1	EnsemblPlants:Bra013672.1-P	EnsemblPlantsGene:Bra013672	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002545AF1
UniProt:M4DB12	MapMan:35.2	:	:	:	:

Description

AT4G23060 (E=1e-131) IQD22 | IQD22 (IQ-domain 22); calmodulin binding

Coordinates

chrA01:+:7032971..7035946

Molecular Weight (calculated)

54602.0 Da

IEP (calculated)

10.845

GRAVY (calculated)

-0.754

Length

496 amino acids

Sequence
(BLAST)

001: MGKASRWFRN LFGLKKTEPG YPDPSLETPS RSYTKRRWSF VKSKREKGTA PPNQHPPPPS SLPNSTPPPS SYYPKSSPSP YHQSSPSSQG RRRKQKPVWE
101: DEGDEDSAKH AIAVAAATAA VAKAAVNAAN AAAAVVRLTS KSGRIMRSPV TAHFSNGFED VPAYVSKFDG HGSGRGVRED LAAIKIQSAF RGYLARRALR
201: ALKGLVRLQA IVRGHIERKR MSVHLRRMHA LVRAQARVRA SRVIVTSESS SSQSNNTKSS HFQNPGPPTP EKLEHSISSR SSKLGHSHLF KRNGSKANNN
301: SNKPYTSAHR EVFTAMNEEE KILEIDRKHN SFHTRRSRPD LFYSSHLVLD NSGRSGPVYA MPFSPSSSHE ETVNQFFTAE NSPQLYSATS VSKRSAFTAS
401: SIAPSDCTKS CCYADHPSYM ACTESSRAKA RSASAPKSRP QLFYDQSSSK RFGFVDVPYC GGDTKSGSAL HASFMNKAYP GSGRLDRLGM PISYRY

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.