Factsheet for Solyc08g007930.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g007920.1.1	Tomato	cytosol	93.83	91.03
PGSC0003DMT400014796	Potato	cytosol	91.19	57.5
Solyc08g080470.2.1	Tomato	plastid	57.71	26.25
KRH77498	Soybean	cytosol, mitochondrion	44.93	25.76
VIT_02s0025g04120.t01	Wine grape	mitochondrion	54.63	25.1
GSMUA_Achr8P11920_001	Banana	cytosol	37.89	23.96
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	42.73	22.61
KRH03972	Soybean	cytosol	43.61	22.15
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	44.49	21.96
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	44.49	21.86
HORVU0Hr1G005320.2	Barley	cytosol	34.8	21.7
Os04t0569900-01	Rice	cytosol, mitochondrion	44.05	21.55
CDX76341	Canola	mitochondrion, plastid	39.65	21.43
Bra020822.1-P	Field mustard	mitochondrion, plastid	39.65	21.43
EES12687	Sorghum	cytosol, mitochondrion	44.05	21.41
KRH57246	Soybean	cytosol	41.85	21.35
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	40.97	21.23
Zm00001d002630_P002	Maize	mitochondrion	42.73	21.23
CDY41368	Canola	mitochondrion, plastid	39.21	21.19
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	44.93	20.99
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	42.29	20.91
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	38.77	20.8
Solyc06g066430.2.1	Tomato	nucleus	35.68	20.66
CDX94150	Canola	nucleus	40.09	19.61
CDX98787	Canola	mitochondrion	25.55	19.59
Zm00001d026084_P001	Maize	mitochondrion	42.29	19.35
Solyc12g008520.1.1	Tomato	cytosol	34.8	19.32
CDY41252	Canola	cytosol, mitochondrion	40.97	19.06
AT4G23060.1	Thale cress	mitochondrion, nucleus	40.53	19.01
CDX98786	Canola	nucleus	39.65	18.95
Bra019337.1-P	Field mustard	nucleus	39.21	18.9
Bra013672.1-P	Field mustard	mitochondrion, nucleus	40.97	18.75
CDY53133	Canola	nucleus	40.09	18.72
Solyc09g082560.2.1	Tomato	nucleus	33.92	16.49
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	28.19	15.61
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	28.63	15.44
Solyc01g088250.2.1	Tomato	cytosol, plastid	26.87	13.32
Solyc02g087760.2.1	Tomato	nucleus	30.4	12.41
Solyc05g007130.2.1	Tomato	cytosol, plastid	22.47	9.26
Solyc04g081210.2.1	Tomato	nucleus	25.11	6.61

Protein Annotations

EnsemblPlants:Solyc08g007930.1.1	EnsemblPlantsGene:Solyc08g007930.1	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	UniParc:UPI000276CA52	UniProt:K4CIS8	MapMan:35.2

Description

No Description!

Coordinates

chr8:+:2436580..2438211

Molecular Weight (calculated)

25676.5 Da

IEP (calculated)

11.322

GRAVY (calculated)

-0.833

Length

227 amino acids

Sequence
(BLAST)

001: MGKASKWFKA LLGFKKNDSS ISSTNKKKRG DVKSYKDKDF QQHHEKSHYM NSSAGVDPAI YEVHSSLTTS SVIRATMWSG EEWAAVVIQS HFRAHLSRRA
101: LRALKGLVKF QALARGHIVR KQAADMLRRM QALIRAQSRA RLGRSMVFES PPFNAKSTQS IHHGPTTSSR CTRSRTGPFT PTKSSTRSYT SDEYSNNHPN
201: YMSYTEAAKA KTRSMSAPRL RSQYDKK

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.