Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 82.53 | 87.91 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 53.49 | 52.24 |
| KRH23930 | Soybean | nucleus | 46.07 | 45.87 |
| KRH39865 | Soybean | nucleus | 46.94 | 45.84 |
| Bra023414.1-P | Field mustard | nucleus | 36.24 | 42.03 |
| CDX85648 | Canola | nucleus | 36.24 | 42.03 |
| KRH63082 | Soybean | cytosol | 40.83 | 41.56 |
| AT5G13460.1 | Thale cress | nucleus | 39.96 | 41.31 |
| CDX78523 | Canola | nucleus | 39.74 | 40.81 |
| Bra006201.1-P | Field mustard | nucleus | 39.74 | 40.72 |
| KRH29958 | Soybean | cytosol, mitochondrion | 40.61 | 40.7 |
| CDX70505 | Canola | nucleus | 39.52 | 40.58 |
| CDX91120 | Canola | nucleus | 31.88 | 38.93 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 28.82 | 32.2 |
| Solyc08g007920.1.1 | Tomato | cytosol | 14.63 | 28.63 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 27.95 | 28.51 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 25.98 | 28.27 |
| Solyc08g007930.1.1 | Tomato | cytosol | 13.32 | 26.87 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 26.86 | 25.84 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 27.07 | 25.83 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 26.64 | 25.63 |
| Os03t0355700-00 | Rice | cytosol | 25.11 | 25.5 |
| EER94844 | Sorghum | cytosol | 26.2 | 24.05 |
| Solyc06g066430.2.1 | Tomato | nucleus | 20.52 | 23.98 |
| Zm00001d029197_P001 | Maize | nucleus | 24.67 | 23.74 |
| Solyc12g008520.1.1 | Tomato | cytosol | 20.74 | 23.23 |
| Solyc09g082560.2.1 | Tomato | nucleus | 22.49 | 22.06 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 25.55 | 21.04 |
| Solyc08g080470.2.1 | Tomato | plastid | 20.31 | 18.64 |
| Solyc03g026110.2.1 | Tomato | cytosol, mitochondrion | 19.0 | 17.9 |
| Solyc02g087760.2.1 | Tomato | nucleus | 20.31 | 16.73 |
| Solyc05g007130.2.1 | Tomato | cytosol, plastid | 17.47 | 14.52 |
| Solyc04g081210.2.1 | Tomato | nucleus | 19.65 | 10.44 |
Protein Annotations
| EnsemblPlants:Solyc01g088250.2.1 | EnsemblPlantsGene:Solyc01g088250.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS |
| PANTHER:PTHR32295 | PANTHER:PTHR32295:SF35 | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | SEG:seg |
| SMART:SM00015 | UniParc:UPI000276175F | UniProt:K4AYL5 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1:+:83063869..83066606
Molecular Weight (calculated)
53073.3 Da
IEP (calculated)
10.698
GRAVY (calculated)
-0.829
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKKSWFNL LKTFFVSGSE SRLDKGKRKR WVFTRLKIRR LVATSALSPP RERRQQKTEE KQNKHAINVD VETINESNVD AENAKVYFKE DIESIHEPNN
101: ETLVLSKLTI HGEETKYFYL YERRIENLAA IKIQTAFRGY LARKALRALK GLVRLQAIVR GRAVRRQAIA TLRSLQSIVN IQSEVCAKRC DNQVKSTVHC
201: QEKTLMDLGE KDIKIDLNSQ KRWDNRYLSK EEANKMFSSK REAAIKRERI REYWLSHRRS TESDINGRRR YWLEQWVDAQ LAKRDDLKNV DTLFSARNRE
301: EFERKEMKPK PSLRQYHTDQ ELVSPVYVPR RSFHHRRQKS TGDHDNTFMG SPSIPTYMAA TESAKAKARS MSSPRLRPIN TDVYSEINSP YKYKLSPISS
401: INSDATVTSR MGSVPGFSQR SPCLKGTPGP IKSTRSIKDL SFGSDGAFAN WDRIGACR
101: ETLVLSKLTI HGEETKYFYL YERRIENLAA IKIQTAFRGY LARKALRALK GLVRLQAIVR GRAVRRQAIA TLRSLQSIVN IQSEVCAKRC DNQVKSTVHC
201: QEKTLMDLGE KDIKIDLNSQ KRWDNRYLSK EEANKMFSSK REAAIKRERI REYWLSHRRS TESDINGRRR YWLEQWVDAQ LAKRDDLKNV DTLFSARNRE
301: EFERKEMKPK PSLRQYHTDQ ELVSPVYVPR RSFHHRRQKS TGDHDNTFMG SPSIPTYMAA TESAKAKARS MSSPRLRPIN TDVYSEINSP YKYKLSPISS
401: INSDATVTSR MGSVPGFSQR SPCLKGTPGP IKSTRSIKDL SFGSDGAFAN WDRIGACR
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Arabidopsis Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.