Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G168000.2 | Wheat | nucleus | 97.27 | 96.46 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 96.22 | 96.22 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 91.39 | 78.24 |
| Os03t0355700-00 | Rice | cytosol | 69.54 | 73.39 |
| Zm00001d029197_P001 | Maize | nucleus | 67.65 | 67.65 |
| EER94844 | Sorghum | cytosol | 69.96 | 66.73 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 43.28 | 45.88 |
| CDX70272 | Canola | cytosol, mitochondrion | 20.8 | 33.79 |
| CDY41423 | Canola | cytosol, mitochondrion | 20.38 | 33.11 |
| CDY72577 | Canola | cytosol, mitochondrion | 19.12 | 31.38 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 30.67 | 31.13 |
| Bra009498.1-P | Field mustard | cytosol, mitochondrion | 24.79 | 30.89 |
| PGSC0003DMT400033127 | Potato | cytosol, mitochondrion | 26.05 | 30.62 |
| Bra028807.1-P | Field mustard | mitochondrion | 24.37 | 30.53 |
| KRH23930 | Soybean | nucleus | 29.41 | 30.43 |
| KRH33197 | Soybean | cytosol, mitochondrion | 24.79 | 30.26 |
| VIT_08s0007g05960.t01 | Wine grape | cytosol | 26.89 | 30.12 |
| Solyc04g016480.2.1 | Tomato | mitochondrion, nucleus | 25.84 | 30.0 |
| KRH39865 | Soybean | nucleus | 28.99 | 29.42 |
| CDY14162 | Canola | endoplasmic reticulum | 20.38 | 28.96 |
| CDY04907 | Canola | endoplasmic reticulum | 20.38 | 28.96 |
| KRH29958 | Soybean | cytosol, mitochondrion | 26.68 | 27.79 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 23.53 | 27.72 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 26.26 | 27.53 |
| CDY41417 | Canola | mitochondrion | 17.02 | 27.09 |
| KRH63082 | Soybean | cytosol | 25.42 | 26.89 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 25.84 | 26.86 |
| Bra023414.1-P | Field mustard | nucleus | 22.06 | 26.58 |
| CDX85648 | Canola | nucleus | 22.06 | 26.58 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 26.05 | 26.55 |
| VIT_08s0007g05980.t01 | Wine grape | cytosol | 25.21 | 26.55 |
| Solyc10g079240.1.1 | Tomato | mitochondrion, nucleus | 23.32 | 26.37 |
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 23.32 | 25.81 |
| CDX70505 | Canola | nucleus | 23.95 | 25.56 |
| CDX78523 | Canola | nucleus | 23.95 | 25.56 |
| Bra006201.1-P | Field mustard | nucleus | 23.95 | 25.5 |
| AT5G13460.1 | Thale cress | nucleus | 22.9 | 24.61 |
| CDX91120 | Canola | nucleus | 18.91 | 24.0 |
| TraesCS2A01G470100.1 | Wheat | cytosol, mitochondrion | 21.85 | 23.96 |
| TraesCS1A01G341900.1 | Wheat | cytosol | 17.23 | 23.5 |
| TraesCS3A01G275900.1 | Wheat | mitochondrion | 18.07 | 22.99 |
| TraesCS5A01G377500.1 | Wheat | cytosol | 22.06 | 22.73 |
| TraesCS4A01G028700.1 | Wheat | cytosol, mitochondrion | 21.22 | 22.2 |
| TraesCS7A01G332500.1 | Wheat | cytosol, mitochondrion | 19.33 | 20.77 |
| TraesCS5A01G055100.1 | Wheat | cytosol, mitochondrion | 17.44 | 20.65 |
| PGSC0003DMT400021096 | Potato | nucleus | 8.4 | 18.1 |
| TraesCS1A01G357500.3 | Wheat | cytosol, mitochondrion, plastid | 19.96 | 16.41 |
| TraesCS3A01G244100.1 | Wheat | cytosol, plastid | 18.07 | 15.69 |
| TraesCS5A01G502100.1 | Wheat | cytosol, plastid | 10.29 | 12.76 |
| TraesCS2A01G492300.1 | Wheat | nucleus | 18.28 | 10.1 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G163000.1 | EnsemblPlantsGene:TraesCS5A01G163000 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF41 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5A:-:348717873..348720503
Molecular Weight (calculated)
52873.9 Da
IEP (calculated)
10.771
GRAVY (calculated)
-0.707
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKKKGWFE RIKRLFISEP KQKPKPDKKV KSKRWLVGKL KTQHSFALPA PEPEPATGQI QIRHAEEEQS KHAVAVALAS AAAAEAAVAA AHAAAEVVRL
101: TGPPSPAPAR EDPASSGHEL FAAVAIQSAY RGYLARRALR ALKGLVRLQA VIRGQAVRRQ TATTLRGLES LVKIQARQRA RADVEHEQEH SHDGMDALLR
201: RGRELYAAAL QEQQQSSRGW DGSTLSKEEM GAVMRSREEA AIKRVRALQY ASIQNEKIGI RRQPMSRDEM ETLNQRWSWL EEWVGSQPFD KDVAVDVVTH
301: PHPPPPRSRD SLACLEDDDD RDDDGYGRRL GYSSRRSFGR ARRTPGRGSI DDGLQACSPA VAFPGYMAST ASAKAKFRSM STPKERFAVP SDAYSEQCFA
401: DRLMSPIPSM SPMPSIASDM GFARSSRPPV AQRSPRVKGG PMTPSRIRSR RSPSRHSFGS EAALHQIQME HYTPIR
101: TGPPSPAPAR EDPASSGHEL FAAVAIQSAY RGYLARRALR ALKGLVRLQA VIRGQAVRRQ TATTLRGLES LVKIQARQRA RADVEHEQEH SHDGMDALLR
201: RGRELYAAAL QEQQQSSRGW DGSTLSKEEM GAVMRSREEA AIKRVRALQY ASIQNEKIGI RRQPMSRDEM ETLNQRWSWL EEWVGSQPFD KDVAVDVVTH
301: PHPPPPRSRD SLACLEDDDD RDDDGYGRRL GYSSRRSFGR ARRTPGRGSI DDGLQACSPA VAFPGYMAST ASAKAKFRSM STPKERFAVP SDAYSEQCFA
401: DRLMSPIPSM SPMPSIASDM GFARSSRPPV AQRSPRVKGG PMTPSRIRSR RSPSRHSFGS EAALHQIQME HYTPIR
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Arabidopsis Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.