CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72577	Canola	cytosol, mitochondrion	69.9	72.07
CDX70272	Canola	cytosol, mitochondrion	67.56	68.94
CDY41423	Canola	cytosol, mitochondrion	67.56	68.94
Bra028807.1-P	Field mustard	mitochondrion	73.24	57.63
CDY14162	Canola	endoplasmic reticulum	57.86	51.64
CDY04907	Canola	endoplasmic reticulum	57.86	51.64
KRH33197	Soybean	cytosol, mitochondrion	42.14	32.31
VIT_08s0007g05960.t01	Wine grape	cytosol	42.14	29.65
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	38.46	28.4
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	38.13	27.8
CDY29016	Canola	mitochondrion	9.03	26.21
CDX90650	Canola	mitochondrion	9.03	26.21
VIT_08s0007g05980.t01	Wine grape	cytosol	37.79	25.0
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	34.45	24.47
CDY29768	Canola	cytosol	12.71	22.75
CDX73724	Canola	mitochondrion	9.03	20.77
GSMUA_Achr3P17450_001	Banana	nucleus	31.1	20.71
CDX91120	Canola	nucleus	24.08	19.2
CDY46537	Canola	cytosol, mitochondrion	18.06	18.62
CDX85648	Canola	nucleus	24.41	18.48
CDX70505	Canola	nucleus	27.09	18.16
CDY53440	Canola	mitochondrion	17.39	17.93
CDX78003	Canola	mitochondrion	9.03	17.76
CDX78523	Canola	nucleus	26.42	17.71
CDX78285	Canola	plastid	19.73	17.15
TraesCS5B01G160400.1	Wheat	cytosol	27.09	17.02
TraesCS5A01G163000.1	Wheat	nucleus	27.09	17.02
CDX98994	Canola	mitochondrion	20.07	16.95
CDX70019	Canola	cytosol, mitochondrion	20.07	16.95
CDY45643	Canola	cytosol	18.39	16.87
EER94844	Sorghum	cytosol	28.09	16.83
TraesCS5D01G168000.2	Wheat	nucleus	26.76	16.67
Zm00001d029197_P001	Maize	nucleus	26.42	16.6
PGSC0003DMT400021096	Potato	nucleus	12.04	16.29
CDY00253	Canola	plastid	21.4	16.24
CDX86928	Canola	mitochondrion, plastid	21.4	16.24
Os03t0355700-00	Rice	cytosol	24.41	16.19
CDY43103	Canola	cytosol	19.73	16.03
CDY00251	Canola	plastid	21.4	15.57
CDX82400	Canola	cytosol	19.06	15.28
CDX81042	Canola	plastid	19.73	15.25
CDX92076	Canola	cytosol	19.73	15.25
CDY47784	Canola	mitochondrion	19.73	15.21
CDY30233	Canola	mitochondrion	19.73	15.21
CDY67178	Canola	cytosol, mitochondrion	19.4	14.95
CDX75883	Canola	cytosol	18.73	14.93
CDY68636	Canola	cytosol	19.4	14.91
CDY41368	Canola	mitochondrion, plastid	20.07	14.29
CDX76341	Canola	mitochondrion, plastid	19.73	14.05
HORVU5Hr1G050840.5	Barley	cytosol, plastid	25.75	13.85
CDY53133	Canola	nucleus	22.41	13.79
CDY41252	Canola	cytosol, mitochondrion	22.41	13.73
CDX94150	Canola	nucleus	20.74	13.36
CDX98786	Canola	nucleus	20.4	12.84
CDY50677	Canola	nucleus	15.72	12.77
CDY36861	Canola	nucleus	15.72	12.57
CDY64325	Canola	cytosol	15.38	12.33
CDX98787	Canola	mitochondrion	10.7	10.81
CDY19251	Canola	cytosol, mitochondrion	15.72	8.39
CDY41676	Canola	cytosol, plastid	15.72	8.17
CDY26720	Canola	cytosol, mitochondrion	15.38	8.16
CDX83805	Canola	cytosol, mitochondrion	15.05	8.06
CDY04138	Canola	cytosol, plastid	15.05	8.02
CDY04137	Canola	cytosol, plastid	15.05	7.99
CDY67405	Canola	cytosol	15.38	7.94
CDY49085	Canola	cytosol	16.05	7.83
CDY39317	Canola	cytosol	15.72	7.74
CDY03037	Canola	cytosol	14.72	7.61
CDY17427	Canola	cytosol, plastid	14.38	7.58
CDY45197	Canola	nucleus, plastid	14.38	7.38
CDX96693	Canola	nucleus	15.05	6.69
CDY44186	Canola	nucleus, plastid	14.72	6.02
CDX83739	Canola	nucleus	14.38	5.82
CDY29389	Canola	nucleus, plastid	14.38	5.75
CDY62588	Canola	nucleus	14.05	5.67
CDX75112	Canola	cytosol	2.01	4.32

Protein Annotations

EnsemblPlants:CDY41417	EnsemblPlantsGene:GSBRNA2T00073005001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41	PFscan:PS50096	ProteinID:CDY41417	ProteinID:CDY41417.1
SEG:seg	UniParc:UPI0004EEB09D	UniProt:A0A078HU87	MapMan:35.2	:	:

Description

BnaCnng10530DBnaCnng10530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU87]

Coordinates

chrLK032497:+:202016..203568

Molecular Weight (calculated)

34439.1 Da

IEP (calculated)

11.966

GRAVY (calculated)

-0.739

Length

299 amino acids

Sequence
(BLAST)

001: MAKRRSWFGW IKRLFICEAK AKSEKPRRLR WVLRRLKLRH QIATPTQETR TLNKATEDQR KHAMNVAIAT AAAAEAAVAG LQPPRQLLST DPNLAAIKIQ
101: INDLGSLTVK ALRALKALVR LQAIVRGRAV RRKVSSNKAS TSSLIQRKHL SKTKTEIKEE LKIPKRSMCN GQNGWDSSAL TKEDIKAIRL RKQEGAVKRE
201: RMLKYSRSHR ERRSPHMLLE SLYTTDMGMR SCRLEHWGES KSEMVVVPTK VKLRTLQRQD SGDGQDSPFS FPRRSFNLRK HFRRRGGNLR SPQEAWLLH

Best Arabidopsis Sequence Match ( AT5G03960.1 )
(BLAST)

001: MAKRRSWFGW MKRLFICEAK ARAEKPRRLR WVFKRLKLRP QLATCGQETR TLNEATQDQR KHAMNVAIAT AAAAEAAVAA AKAAAEVVRM AGNAFTSQHF
101: VKKLAPNVAA IKIQSAFRAS LARKALRALK ALVRLQAIVR GRAVRRKVSA LLKSSHSNKA STSNIIQRQT ERKHWSNTKS EIKEELQVSN HSLCNSKVKC
201: NGWDSSALTK EDIKAIWLRK QEGVIKRDRM LKYSRSQRER RSPHMLVESL YAKDMGMRSC RLEHWGESKS AKSINSFLIP SEMLVPTKVK LRSLQRQDSG
301: DGQDSPFSFP RRSFSRLEQS ILEDESWFQR SNGFQPYMSV TESAREKMRS LSTPRQRVGI MDSLFDNYKK DGDKVSLWST FVCENSKINN AKKSSLTTYQ
401: HNC

Arabidopsis Description

IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.