Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036898.1-P | Field mustard | cytosol | 90.88 | 92.62 |
| CDY29768 | Canola | cytosol | 40.48 | 90.42 |
| CDY50677 | Canola | nucleus | 78.02 | 79.08 |
| CDY36861 | Canola | nucleus | 77.48 | 77.27 |
| AT4G14750.3 | Thale cress | cytosol | 77.48 | 62.83 |
| GSMUA_Achr3P14930_001 | Banana | cytosol | 44.5 | 43.8 |
| GSMUA_Achr8P26800_001 | Banana | cytosol | 42.9 | 42.78 |
| CDX90650 | Canola | mitochondrion | 11.53 | 41.75 |
| CDY29016 | Canola | mitochondrion | 11.26 | 40.78 |
| CDX73724 | Canola | mitochondrion | 11.53 | 33.08 |
| TraesCS5A01G377500.1 | Wheat | cytosol | 40.75 | 32.9 |
| TraesCS5B01G381100.1 | Wheat | cytosol, mitochondrion | 40.48 | 32.68 |
| TraesCS5D01G387500.1 | Wheat | cytosol | 40.21 | 32.4 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 40.48 | 32.27 |
| Os03t0636700-00 | Rice | mitochondrion | 38.07 | 31.77 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 38.87 | 30.66 |
| CDX78003 | Canola | mitochondrion | 12.33 | 30.26 |
| EER93770 | Sorghum | cytosol, mitochondrion | 38.87 | 29.59 |
| TraesCSU01G074100.1 | Wheat | cytosol, mitochondrion | 29.49 | 27.64 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 28.95 | 27.62 |
| TraesCS5A01G055100.1 | Wheat | cytosol, mitochondrion | 29.49 | 27.36 |
| Os12t0604500-00 | Rice | cytosol | 32.71 | 27.35 |
| KRH68719 | Soybean | cytosol | 27.35 | 27.27 |
| CDY53440 | Canola | mitochondrion | 20.91 | 26.9 |
| CDY46537 | Canola | cytosol, mitochondrion | 20.91 | 26.9 |
| KRG96957 | Soybean | cytosol | 26.54 | 26.76 |
| Zm00001d041437_P001 | Maize | cytosol, mitochondrion | 29.76 | 25.06 |
| CDX78285 | Canola | plastid | 23.06 | 25.0 |
| CDY45643 | Canola | cytosol | 21.72 | 24.85 |
| CDX82400 | Canola | cytosol | 24.13 | 24.13 |
| CDX75883 | Canola | cytosol | 24.13 | 24.0 |
| CDY43103 | Canola | cytosol | 23.59 | 23.91 |
| CDY68636 | Canola | cytosol | 24.93 | 23.91 |
| CDX92076 | Canola | cytosol | 24.66 | 23.77 |
| CDY67178 | Canola | cytosol, mitochondrion | 24.66 | 23.71 |
| CDX70019 | Canola | cytosol, mitochondrion | 22.25 | 23.45 |
| CDX98994 | Canola | mitochondrion | 22.25 | 23.45 |
| OQU79535 | Sorghum | cytosol, mitochondrion | 28.95 | 23.33 |
| CDY00253 | Canola | plastid | 23.32 | 22.08 |
| CDX81042 | Canola | plastid | 22.79 | 21.96 |
| CDX86928 | Canola | mitochondrion, plastid | 23.06 | 21.83 |
| CDY41368 | Canola | mitochondrion, plastid | 24.13 | 21.43 |
| CDX98787 | Canola | mitochondrion | 16.89 | 21.28 |
| CDX76341 | Canola | mitochondrion, plastid | 23.86 | 21.19 |
| CDY00251 | Canola | plastid | 23.32 | 21.17 |
| CDY47784 | Canola | mitochondrion | 21.72 | 20.88 |
| CDY30233 | Canola | mitochondrion | 21.72 | 20.88 |
| CDY41252 | Canola | cytosol, mitochondrion | 26.81 | 20.49 |
| CDX98786 | Canola | nucleus | 26.01 | 20.42 |
| CDY53133 | Canola | nucleus | 26.54 | 20.37 |
| CDX94150 | Canola | nucleus | 25.2 | 20.26 |
| CDX85648 | Canola | nucleus | 19.03 | 17.97 |
| CDY72577 | Canola | cytosol, mitochondrion | 13.94 | 17.93 |
| CDY41423 | Canola | cytosol, mitochondrion | 13.4 | 17.06 |
| CDX70272 | Canola | cytosol, mitochondrion | 13.4 | 17.06 |
| CDX91120 | Canola | nucleus | 16.62 | 16.53 |
| CDY14162 | Canola | endoplasmic reticulum | 13.94 | 15.52 |
| CDY04907 | Canola | endoplasmic reticulum | 13.94 | 15.52 |
| CDX78523 | Canola | nucleus | 18.5 | 15.47 |
| CDY41417 | Canola | mitochondrion | 12.33 | 15.38 |
| CDX70505 | Canola | nucleus | 18.23 | 15.25 |
| CDY41676 | Canola | cytosol, plastid | 20.91 | 13.57 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.11 | 13.44 |
| CDY67405 | Canola | cytosol | 20.64 | 13.3 |
| CDY19251 | Canola | cytosol, mitochondrion | 19.57 | 13.04 |
| CDY03037 | Canola | cytosol | 20.11 | 12.98 |
| CDY26720 | Canola | cytosol, mitochondrion | 19.3 | 12.77 |
| CDY45197 | Canola | nucleus, plastid | 19.3 | 12.35 |
| CDY04137 | Canola | cytosol, plastid | 18.23 | 12.08 |
| CDY17427 | Canola | cytosol, plastid | 18.23 | 11.99 |
| CDY04138 | Canola | cytosol, plastid | 17.96 | 11.94 |
| CDX96693 | Canola | nucleus | 19.84 | 11.0 |
| CDX75112 | Canola | cytosol | 4.02 | 10.79 |
| CDY49085 | Canola | cytosol | 17.16 | 10.44 |
| CDY39317 | Canola | cytosol | 16.89 | 10.38 |
| CDX83739 | Canola | nucleus | 17.43 | 8.8 |
| CDY62588 | Canola | nucleus | 16.89 | 8.5 |
| CDY44186 | Canola | nucleus, plastid | 16.62 | 8.48 |
| CDY29389 | Canola | nucleus, plastid | 16.09 | 8.02 |
Protein Annotations
| EnsemblPlants:CDY64325 | EnsemblPlantsGene:GSBRNA2T00041113001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF45 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | ProteinID:CDY64325 | ProteinID:CDY64325.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EC7C25 |
| UniProt:A0A078JDF4 | MapMan:35.2 | : | : | : | : |
Description
BnaC01g42170DBnaC01g42170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDF4]
Coordinates
chrLK034442:-:4435..5861
Molecular Weight (calculated)
42230.2 Da
IEP (calculated)
10.392
GRAVY (calculated)
-0.782
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTSKWIRN FLTGKKERSK EKIIQSECGG FTSPVPGIPK EKRRWIFRRS SSTRPPVCAS TLKVSSPPVQ PSLPPPPQPF EVANVDTEHD ENKGAEIAMA
101: VEEFAAVKIQ AYYRSHLARK ALRALKGLVK LQALVRGHLV RKRATATLRC MQALITLQAK AREQRIRTIG DSTPKSTNPR TPIHKTRISD IYHENDENIE
201: NVEMEIQSKF YSPAPSITDM SPSHFEDCNS FSRAQRSPQC FGFKEYYNGD TLSSYGYPLF PNYMANTQSS KAKARSQSAP KQRPYEMYEK HTSARRRSNV
301: EAPRNGVLKA VRMHRASSQL GKESQHEYYP WMATKFHRSN ISLMASECGS TSTFMTNTNY GRDVDVQGNV QQA
101: VEEFAAVKIQ AYYRSHLARK ALRALKGLVK LQALVRGHLV RKRATATLRC MQALITLQAK AREQRIRTIG DSTPKSTNPR TPIHKTRISD IYHENDENIE
201: NVEMEIQSKF YSPAPSITDM SPSHFEDCNS FSRAQRSPQC FGFKEYYNGD TLSSYGYPLF PNYMANTQSS KAKARSQSAP KQRPYEMYEK HTSARRRSNV
301: EAPRNGVLKA VRMHRASSQL GKESQHEYYP WMATKFHRSN ISLMASECGS TSTFMTNTNY GRDVDVQGNV QQA
001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVQ GNNNMY
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.