CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68719	Soybean	cytosol	90.0	89.04
CDY29768	Canola	cytosol	16.49	36.53
VIT_14s0030g01880.t01	Wine grape	nucleus	35.95	34.02
GSMUA_Achr8P26800_001	Banana	cytosol	29.73	29.41
KRH07958	Soybean	mitochondrion	11.08	29.08
CDY50677	Canola	nucleus	28.65	28.8
Bra039715.1-P	Field mustard	nucleus, plastid	28.65	28.65
CDY36861	Canola	nucleus	28.38	28.07
GSMUA_Achr3P14930_001	Banana	cytosol	28.38	27.7
Bra036898.1-P	Field mustard	cytosol	27.3	27.6
CDY64325	Canola	cytosol	26.76	26.54
KRH69109	Soybean	nucleus	27.3	24.22
KRH31669	Soybean	cytosol, mitochondrion	27.57	24.11
KRH35475	Soybean	cytosol	30.54	24.09
KRG91354	Soybean	cytosol, plastid	29.73	23.5
KRH47199	Soybean	cytosol	24.32	22.73
AT4G14750.3	Thale cress	cytosol	28.11	22.61
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	23.78	22.11
Zm00001d033280_P001	Maize	cytosol, mitochondrion	28.11	21.99
Os03t0636700-00	Rice	mitochondrion	26.49	21.92
KRH44268	Soybean	cytosol	23.78	21.89
KRH23382	Soybean	cytosol	22.16	21.58
KRH09951	Soybean	cytosol	21.89	21.43
TraesCS5A01G377500.1	Wheat	cytosol	26.76	21.43
KRH48993	Soybean	plastid	5.41	21.28
KRH77498	Soybean	cytosol, mitochondrion	22.7	21.21
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	26.49	21.21
TraesCS5D01G387500.1	Wheat	cytosol	26.49	21.17
HORVU5Hr1G093430.4	Barley	cytosol	26.76	21.15
EER93770	Sorghum	cytosol, mitochondrion	27.84	21.02
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	22.7	20.9
Os12t0604500-00	Rice	cytosol	25.14	20.85
KRH57246	Soybean	cytosol	24.32	20.22
KRH03972	Soybean	cytosol	24.32	20.13
Zm00001d041437_P001	Maize	cytosol, mitochondrion	24.05	20.09
KRG91452	Soybean	cytosol	23.24	18.86
OQU79535	Sorghum	cytosol, mitochondrion	23.51	18.79
KRH74242	Soybean	cytosol, mitochondrion	21.08	18.57
KRH35361	Soybean	cytosol, mitochondrion	22.97	18.32
KRH09113	Soybean	cytosol	23.51	18.24
KRH38565	Soybean	cytosol	23.51	18.05
KRH48992	Soybean	endoplasmic reticulum	16.22	17.75
KRH60203	Soybean	cytosol, mitochondrion	17.03	17.5
KRH41488	Soybean	cytosol, mitochondrion	20.0	16.97
KRH23930	Soybean	nucleus	19.46	15.65
KRH33197	Soybean	cytosol, mitochondrion	16.22	15.38
KRH39865	Soybean	nucleus	19.19	15.14
KRH63082	Soybean	cytosol	17.57	14.44
KRH29958	Soybean	cytosol, mitochondrion	17.84	14.44
KRH63392	Soybean	cytosol	21.62	13.72
KRH54515	Soybean	cytosol	21.62	13.7
KRH56937	Soybean	cytosol	20.81	13.14
KRH03447	Soybean	nucleus	20.54	12.93
KRH45861	Soybean	plastid	17.3	11.7
KRH74806	Soybean	cytosol, plastid	17.03	11.19
KRG99144	Soybean	cytosol, plastid	16.22	10.97
KRH69321	Soybean	cytosol, mitochondrion	16.49	10.83
KRH51729	Soybean	cytosol	20.0	8.72
KRH61064	Soybean	nucleus	10.27	5.23

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100781320	MapMan:35.2	EMBL:ACUP02012169	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_19G243700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:K7N033
EnsemblPlants:KRG96957	ProteinID:KRG96957	ProteinID:KRG96957.1	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096
PANTHER:PTHR32295	PANTHER:PTHR32295:SF49	SMART:SM00015	UniParc:UPI000233EB87	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:-:49116859..49119212

Molecular Weight (calculated)

42211.8 Da

IEP (calculated)

11.264

GRAVY (calculated)

-0.837

Length

370 amino acids

Sequence
(BLAST)

001: MGKARKWIRN FLLGKKEDKI KKIEDKSLIV SPKVKCRWSF GKLTGGRITS KVVGHKFSRS FDSGDSAKLQ IQPLLETKTP RHLPKPLAKA SKDKNKAATK
101: IQASFRSYLA RRALHALRGL VKLQALVRGH LVRKQTTATL RGMHALMAIQ VRARIHRIQM AEEANLLGQQ PLQHRQLPYF TDLITEENKD SNDMSVEEIV
201: EVLKSRSGPL DGSYVKGRER DSMTYYSKHV PVVSKRQNQY KKTLMVEPNS LGNYRAMSEF NPATIALSTS QRHYVPHRQS LSPNYMNKTE SSRAKARSQS
301: EPKQRPRRGT RHKGKSVESP LNGPRQNLFS NSLRFDHRSL DHWVINPHGS KNDSRRNSFG SSSVTTESYY

Best Arabidopsis Sequence Match ( AT4G14750.1 )
(BLAST)

001: MGKTSKWFRS LLTGKKERTK EHIIQSECVF TSSIPGTPKE KRRWSFRRSS ATGPPPPACA ITLKDSPPPP PPPPPPPPLQ QPFVVEIVDN EDEQIKNVSA
101: EEIEEFAAIK IQACYRSHLA RKALRALKGL VKLQALVRGH LVRKQATATL RCMQALITLQ AKAREQRIRM IGGDSTNPRT SIHKTRINNF YHENEENIKI
201: VEMDIQSKMY SPAPSALTEM SPRAYSSHFE DCNSFNTAQS SPQCFSRFKE YYNGDTLSSY DYPLFPNYMA NTQSSKAKAR SQSAPKQRPP EIYEKQMSGR
301: RRSSMEAPRN NGVPRAVRMQ RSSSQLGSNT AKESQQHHHH QYYPWMAIKL DRSNISLMES ECGSTSTVMT NTNYGRHVDV QGNNNMY

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.