CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74806	Soybean	cytosol, plastid	88.45	88.45
KRH45861	Soybean	plastid	52.04	53.56
KRG99144	Soybean	cytosol, plastid	50.44	51.92
KRH03447	Soybean	nucleus	36.94	35.37
KRH56937	Soybean	cytosol	36.59	35.15
PGSC0003DMT400045444	Potato	cytosol, plastid	32.5	32.91
KRH54515	Soybean	cytosol	33.93	32.71
Solyc05g007130.2.1	Tomato	cytosol, plastid	31.97	32.67
CDY41676	Canola	cytosol, plastid	33.04	32.35
GSMUA_Achr8P26180_001	Banana	mitochondrion	30.02	32.19
KRH63392	Soybean	cytosol	33.21	32.08
Bra026581.1-P	Field mustard	cytosol	32.68	31.83
CDY67405	Canola	cytosol	32.68	31.78
Bra017409.1-P	Field mustard	cytosol, plastid	31.79	31.68
CDY04137	Canola	cytosol, plastid	31.44	31.44
CDY04138	Canola	cytosol, plastid	31.08	31.19
CDY17427	Canola	cytosol, plastid	31.26	31.04
Bra024806.1-P	Field mustard	cytosol, plastid	32.15	30.94
CDY45197	Canola	nucleus, plastid	31.97	30.87
GSMUA_AchrUn_...	Banana	mitochondrion	27.53	30.63
CDY03037	Canola	cytosol	31.44	30.62
Os05t0535900-01	Rice	cytosol	29.84	29.27
KXG22418	Sorghum	cytosol, plastid	30.02	29.19
KXG33252	Sorghum	cytosol	28.77	28.98
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	29.66	28.84
TraesCS3B01G276000.1	Wheat	cytosol, plastid	28.06	28.83
TraesCS3D01G247300.1	Wheat	cytosol, plastid	28.06	28.83
Zm00001d038838_P001	Maize	mitochondrion	29.31	28.75
TraesCS3A01G244100.1	Wheat	cytosol, plastid	27.89	28.65
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	29.31	28.5
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	29.31	28.5
Zm00001d011138_P003	Maize	cytosol, plastid	29.84	28.43
Os01t0716200-01	Rice	nucleus	28.24	27.7
Zm00001d043655_P002	Maize	mitochondrion	28.06	27.48
AT2G02790.1	Thale cress	cytosol	30.91	27.36
HORVU3Hr1G067750.8	Barley	cytosol, plastid	27.0	27.34
HORVU1Hr1G080360.4	Barley	mitochondrion	28.24	26.99
AT1G14380.1	Thale cress	cytosol	30.91	26.2
CDY39317	Canola	cytosol	26.29	24.38
Bra019653.1-P	Field mustard	cytosol	27.0	24.2
CDY49085	Canola	cytosol	26.11	23.98
KRH48993	Soybean	plastid	3.55	21.28
KRH69109	Soybean	nucleus	14.74	19.9
KRH31669	Soybean	cytosol, mitochondrion	14.39	19.15
KRH07958	Soybean	mitochondrion	4.62	18.44
KRH33197	Soybean	cytosol, mitochondrion	12.61	18.21
KRH77498	Soybean	cytosol, mitochondrion	12.79	18.18
KRH03972	Soybean	cytosol	14.39	18.12
KRH57246	Soybean	cytosol	14.03	17.75
KRG91354	Soybean	cytosol, plastid	14.39	17.31
KRH35475	Soybean	cytosol	14.39	17.27
KRH23930	Soybean	nucleus	13.85	16.96
KRH39865	Soybean	nucleus	14.03	16.84
KRH09113	Soybean	cytosol	14.21	16.77
KRH74242	Soybean	cytosol, mitochondrion	12.43	16.67
KRH60203	Soybean	cytosol, mitochondrion	10.66	16.67
KRH38565	Soybean	cytosol	14.21	16.6
KRH23382	Soybean	cytosol	11.19	16.58
KRH68719	Soybean	cytosol	11.01	16.58
KRG96957	Soybean	cytosol	10.83	16.49
KRH41488	Soybean	cytosol, mitochondrion	12.61	16.28
KRG91452	Soybean	cytosol	13.14	16.23
KRH44268	Soybean	cytosol	11.55	16.17
KRH09951	Soybean	cytosol	10.83	16.14
KRH35361	Soybean	cytosol, mitochondrion	13.14	15.95
KRH47199	Soybean	cytosol	11.19	15.91
KRH48992	Soybean	endoplasmic reticulum	9.24	15.38
KRH29958	Soybean	cytosol, mitochondrion	12.43	15.32
KRH63082	Soybean	cytosol	11.72	14.67
KRH51729	Soybean	cytosol	19.18	12.72
KRH61064	Soybean	nucleus	12.79	9.9

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100808200	MapMan:35.1	EMBL:ACUP02000702	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_02G019700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1JBN5	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
ProteinID:KRH69320.1	EnsemblPlants:KRH69321	ProteinID:KRH69321	ProteinID:KRH69321.1	ProteinID:KRH69322.1	ProteinID:KRH69323.1
ProteinID:KRH69324.1	ProteinID:KRH69325.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096
PANTHER:PTHR32295	PANTHER:PTHR32295:SF48	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0002336C17	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:1802348..1809348

Molecular Weight (calculated)

61721.6 Da

IEP (calculated)

10.500

GRAVY (calculated)

-0.824

Length

563 amino acids

Sequence
(BLAST)

001: MGKGRSPGKW FKNLLLGKKS SSKSTSSKKN DIFKPSIDKD LLVSSEVPVP DPTMDSLQIS TPISGANDYK GVFSEKEVVS RSSHDRDVLS TRVKEAKVQD
101: VANFGSQENL EKLQLTEATI KVQAACRSYL ARRTLQKLKG VIQLQAFIRG HLVRRHAVSA LYCVKGIVKF QALARGYNVR CSDIGLAVQK IRKDTHCSNS
201: VRVVSSTQAE KLSENVFVCK LLASSPYAVP LSLNSDPGEP NMGQKWLDYW TRSHFWASLP EFKKKLESVS DEKNGTSQTV QKGQVKKITR KSPTVKADNV
301: SNLGSNKSKQ HLKKDSSHPL PSAQENPPKE TEKSSFGKTH AHNASNGSEV VNEKRKSGNK KILDHAVIDV SEQGPNASSA KEKDSTVPKS KESDPEKGHG
401: QQTKDKNDNE PHNDPIAVSK TSVKKGGNEG IQVVSENLNG GDNCISNNSQ RRASLPANIN EQENELYNTP VTPRLPSYMA PTESAKARLR GQGSPRFTTD
501: LVDKNSATRR HSLSSSLNGK SGSFSPRAEK LIGVSSRGGI RSDRSLSSSR DGTEKLIQPQ WRR

Best Arabidopsis Sequence Match ( AT1G14380.2 )
(BLAST)

001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEEGDNI ESSGKEKDTG
401: DSVQIESEGK VLEGGDNIEF GEKEKDKADA VPIEFDIVKD EKSPVLDRTE EDELKTAETS DKAEALKCAD VKVSSENGNV GSDNTKQSEK RALLPANIDK
501: QDDGLTLSGR KIPSYMAPTA SAKARVKGEA SPRFAQAKTE INGALRRHSL PSPANGKLST TTMSPRAQKL LLASAKGSMN GDKSFTSSKD ITHKSTRTDW
601: KR

Arabidopsis Description

IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.