Factsheet for TraesCS1B01G374100.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	96.2	96.2
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	95.16	95.16
HORVU1Hr1G080360.4	Barley	mitochondrion	92.06	90.49
Os05t0535900-01	Rice	cytosol	76.17	76.83
KXG22418	Sorghum	cytosol, plastid	71.85	71.85
Zm00001d011138_P003	Maize	cytosol, plastid	71.5	70.05
Zm00001d038838_P001	Maize	mitochondrion	69.43	70.03
TraesCS3B01G276000.1	Wheat	cytosol, plastid	52.68	55.66
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	7.43	47.78
GSMUA_Achr2P15790_001	Banana	cytosol	39.72	40.14
VIT_14s0108g00150.t01	Wine grape	nucleus	39.9	39.97
KRH56937	Soybean	cytosol	39.9	39.42
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	37.31	38.99
KRH03447	Soybean	nucleus	39.55	38.95
GSMUA_Achr4P30750_001	Banana	mitochondrion	17.96	38.81
KRH54515	Soybean	cytosol	37.13	36.82
KRH63392	Soybean	cytosol	36.96	36.71
VIT_17s0000g05840.t01	Wine grape	endoplasmic reticulum, extracellular	39.38	36.6
VIT_01s0026g01790.t01	Wine grape	cytosol	36.44	36.51
PGSC0003DMT400045444	Potato	cytosol, plastid	31.95	33.27
Solyc05g007130.2.1	Tomato	cytosol, plastid	31.61	33.21
KRH45861	Soybean	plastid	30.74	32.54
Bra026581.1-P	Field mustard	cytosol	31.95	32.01
CDY41676	Canola	cytosol, plastid	31.61	31.83
CDY67405	Canola	cytosol	31.78	31.78
CDY45197	Canola	nucleus, plastid	31.95	31.73
Bra017409.1-P	Field mustard	cytosol, plastid	30.92	31.68
CDY04137	Canola	cytosol, plastid	30.74	31.62
CDY03037	Canola	cytosol	31.26	31.31
Bra024806.1-P	Field mustard	cytosol, plastid	31.61	31.28
CDY17427	Canola	cytosol, plastid	30.4	31.04
CDY04138	Canola	cytosol, plastid	30.05	31.02
KRG99144	Soybean	cytosol, plastid	28.84	30.53
KRH74806	Soybean	cytosol, plastid	28.67	29.48
KRH69321	Soybean	cytosol, mitochondrion	28.5	29.31
AT2G02790.1	Thale cress	cytosol	31.43	28.62
AT1G14380.1	Thale cress	cytosol	31.61	27.56
CDY39317	Canola	cytosol	28.32	27.02
CDY49085	Canola	cytosol	28.15	26.59
Bra019653.1-P	Field mustard	cytosol	28.67	26.43
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	13.64	23.3
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	18.13	22.83
TraesCS3B01G309600.1	Wheat	mitochondrion	13.99	21.49
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	15.37	20.41
TraesCS5B01G160400.1	Wheat	cytosol	16.58	20.17
TraesCS7B01G244900.1	Wheat	cytosol	14.85	19.41
TraesCS3B01G127100.1	Wheat	cytosol	15.37	19.22
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	15.2	19.05
TraesCS1B01G142100.1	Wheat	cytosol	14.51	18.5
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	13.99	16.8
TraesCS2B01G520500.3	Wheat	nucleus	20.55	13.89
TraesCS4B01G330700.1	Wheat	mitochondrion	7.08	10.35

Protein Annotations

EnsemblPlants:TraesCS1B01G374100.2	EnsemblPlantsGene:TraesCS1B01G374100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF87	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1B:+:604549290..604553146

Molecular Weight (calculated)

63875.2 Da

IEP (calculated)

10.185

GRAVY (calculated)

-0.778

Length

579 amino acids

Sequence
(BLAST)

001: MGKSPAKWLK SVLFGKKTSR SGSAKAKDLS KAGGNRGYVA AGKEPGFSES SPVISEPVLV TPRNNDAVPE VGKGENSSSQ GEAAAQQEVN HDLEKQSTAG
101: SDVLSNDPER LKEEQAAVKA QAAFRGYLAR RAFRALKGII RLQALIRGHL VRRQAASTLR ATWLIVKFQA IVRGRNVRLS SDAIQFSWKL AEQKSVGAKP
201: DAWRERLASN AFARKLLASP ILVEALHFQY DERDPNSAFN WLERWTISRV WKPVYQTKRN AIADAKPQTK RASYAMETES GKLKRNARKS SALSVEPIPL
301: TNMPLETEKT RRTPRKFTST PADSVPDSQL TELEKVKRSL RKVTNSMAEA SKVSSPACDT PDHPEIECEK PQCTAQEVPV YPEIQEPNHD DQLENAKVDI
401: FVPDLKPEGE VTPYAVTSEE KLDEPAVVAT AAEVMPLQDI DNEENALVND AEQRSREEPL SAESLKGGNR RSSFSTKPEY PENGSKNSPA VPSYMAATKS
501: AKAKLRGQIS PRLSADSAEK TVYTRRHSLP SPANGKQNSH SPRTQRPIHP GTKEGAKVDK SMLSSRDAAE RPMKAEWRR

Best Arabidopsis Sequence Match ( AT1G18840.2 )
(BLAST)

001: MGKPARWLKS VLLGKKPSKS SGSKDKERIV NGKEVVVISK IEESDVVSDL SSIGNAAVYT SGIVETQNLK HEDVSDDEIQ VSEVQPTDSQ DVASVPDDSL
101: SESEKIQQEI AAVTVQAAYR GYLARRAFKI LKGIIRLQAL IRGHMVRRQA VSTLCCVMGI VRLQALARGR EIRHSDIGVE VQRKCHLHHQ PLENKANSVV
201: DTHSYLGINK LTGNAFAQKL LASSPNVLPL SLDNDSSNSI WLENWSASCF WKPVPQPKKA SLRKSQKKFA SNPQIVEAEF ARPKKSVRKV PSSNLDNSSV
301: AQTSSELEKP KRSFRKVSTS QSVEPLPSMD NPQVDLEKVK RGLRKVHNPV VENSIQPQLV PQIAVEKPNG SLEESVNAFD EEKEDEVAET VVQQPEELIQ
401: THTPLGTNES LDSTLVNQIE ESEENVMAEE KEDVKEERTP KQNHKENSAG KENQKSGKKA SSVTATQTAE FQESGNGNQT SSPGIPSYMQ ATKSAKAKLR
501: LQGSSSPRQL GTTEKASRRY SLPSSGNSAK ITSHSPKTRV SNSSGKSGNK TEKTLLSSRE GNGKATPVEW KR

Arabidopsis Description

IQD30At1g18840 [Source:UniProtKB/TrEMBL;Acc:Q501D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.