Factsheet for GSMUA_Achr4P30780_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30750_001	Banana	mitochondrion	39.89	82.46
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	11.55	71.11
GSMUA_Achr2P15790_001	Banana	cytosol	72.74	70.33
GSMUA_Achr8P26180_001	Banana	mitochondrion	38.27	40.38
Os05t0535900-01	Rice	cytosol	40.43	39.02
KXG22418	Sorghum	cytosol, plastid	40.25	38.51
GSMUA_AchrUn_...	Banana	mitochondrion	35.02	38.34
Zm00001d038838_P001	Maize	mitochondrion	39.17	37.8
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	38.99	37.31
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	38.99	37.31
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	38.81	37.13
Zm00001d011138_P003	Maize	cytosol, plastid	39.35	36.89
Os01t0716200-01	Rice	nucleus	37.55	36.24
TraesCS3A01G244100.1	Wheat	cytosol, plastid	34.84	35.22
TraesCS3B01G276000.1	Wheat	cytosol, plastid	34.84	35.22
HORVU1Hr1G080360.4	Barley	mitochondrion	37.18	34.97
KXG33252	Sorghum	cytosol	35.2	34.88
TraesCS3D01G247300.1	Wheat	cytosol, plastid	34.3	34.67
Zm00001d043655_P002	Maize	mitochondrion	35.02	33.74
HORVU3Hr1G067750.8	Barley	cytosol, plastid	33.39	33.27
GSMUA_Achr4P21190_001	Banana	cytosol	11.37	31.34
GSMUA_Achr1P02670_001	Banana	mitochondrion	6.32	24.48
GSMUA_Achr3P14930_001	Banana	cytosol	15.88	23.22
GSMUA_Achr8P26800_001	Banana	cytosol	15.34	22.73
GSMUA_Achr8P11920_001	Banana	cytosol	14.44	22.28
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	15.7	21.75
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	13.18	21.53
GSMUA_Achr8P19690_001	Banana	mitochondrion	10.65	21.45
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	14.26	21.07
GSMUA_AchrUn_...	Banana	cytosol	14.26	20.84
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	15.16	20.69
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	15.88	20.09
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	13.9	19.4
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	16.07	19.39
GSMUA_Achr1P19900_001	Banana	cytosol	8.12	19.31
GSMUA_Achr9P06040_001	Banana	cytosol	13.18	19.01
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	14.44	18.91
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	14.62	18.88
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	13.72	18.81
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	12.64	18.57
GSMUA_Achr10P...	Banana	cytosol	14.26	17.91
GSMUA_Achr11P...	Banana	mitochondrion	6.32	17.59
GSMUA_Achr3P17450_001	Banana	nucleus	13.9	17.15
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	10.83	16.26
GSMUA_Achr1P06080_001	Banana	nucleus	19.86	14.12
GSMUA_Achr3P11240_001	Banana	nucleus	18.41	13.06
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	19.86	13.0
GSMUA_Achr1P19910_001	Banana	nucleus	11.91	11.04

Protein Annotations

EnsemblPlants:GSMUA_Achr4P30780_001	EnsemblPlants:GSMUA_Achr4T30780_001	EnsemblPlantsGene:GSMUA_Achr4G30780_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF42	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002969D7E	UniProt:M0STJ0
MapMan:35.1	:	:	:	:	:

Description

Putative Protein IQ-DOMAIN 31 [Source:GMGC_GENE;Acc:GSMUA_Achr4G30780_001]

Coordinates

chr4:+:28227066..28231819

Molecular Weight (calculated)

61195.0 Da

IEP (calculated)

10.759

GRAVY (calculated)

-0.657

Length

554 amino acids

Sequence
(BLAST)

001: MGKSPAKWIK AVIFGKRSSR SHTSKGKDGL KPGVDKEHFS GGEPSHVTVK SLVITQPVLV SNNSSGPSSE NRTDSTLVTG AVRVESQEIV VHQASSNPAK
101: AMEERAATKV QAAFRGYQSR RVFCALKGII KLQALIRGHL VRRQAVTTLH CMWGIVRFQA LVRGQRVRLS GIGLEVRTKY PQMKSVDDKK LDFSKMQLSA
201: NQFICKLLSA LPVTKPVQIH YDPVEPNSVF SWLERWTSSQ FWNPLPQSKK SVNVKSRVRC SSAVESESVR LKSNVHKNVA AKVDVMTESE RHKRVTRKML
301: IPPADSVVEN PQSEIEKVKR SLRKVSNSKK EPPEKPESEN QKPTCTPRKV TNSLSDAPQV SNEHSSMKIK NDSVVSIDSK LVIVAAVKSV ASGGPKNAVI
401: DDSTAIKPHS PEEICKEESI SNCDGELSLK DEPTSNDIQK SSKRRASFPP KPEPFAENAS QNAPRLPSYM ATTESAKAKL RGQVSPRVGS DSAERYNMPR
501: RHSLPTSTNG KLNLQSSRAH KLIQASCKDG IRNDRSFTSS RDGSEKSIQV GWRR

Best Arabidopsis Sequence Match ( AT1G74690.1 )
(BLAST)

001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR

Arabidopsis Description

IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.