Factsheet for GSMUA_Achr7P06540_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 3
plastid 2
plasma membrane 3
extracellular 2
endoplasmic reticulum 3
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06080_001	Banana	nucleus	61.7	67.01
GSMUA_Achr1P19900_001	Banana	cytosol	16.9	61.37
GSMUA_Achr3P11240_001	Banana	nucleus	56.62	61.33
GSMUA_Achr1P19910_001	Banana	nucleus	42.32	59.87
VIT_18s0001g13870.t01	Wine grape	nucleus	36.52	39.02
KRH51729	Soybean	cytosol	34.16	34.04
PGSC0003DMT400009545	Potato	nucleus	32.98	32.14
Solyc04g081210.2.1	Tomato	nucleus	32.74	32.13
TraesCS2B01G520500.3	Wheat	nucleus	31.68	31.27
TraesCS2A01G492300.1	Wheat	nucleus	31.56	31.01
Os04t0663100-01	Rice	plasma membrane	32.62	30.91
TraesCS2D01G492600.1	Wheat	nucleus	31.32	30.78
EES11606	Sorghum	nucleus	31.8	30.36
GSMUA_Achr4P21190_001	Banana	cytosol	7.21	30.35
Zm00001d001953_P003	Maize	nucleus	32.39	29.88
Zm00001d026535_P003	Maize	nucleus	31.44	29.52
KRH61064	Soybean	nucleus	25.06	29.16
GSMUA_Achr1P02670_001	Banana	mitochondrion	4.85	28.67
Bra016490.1-P	Field mustard	nucleus	24.94	28.55
AT1G19870.1	Thale cress	nucleus	25.77	27.46
Bra025777.1-P	Field mustard	nucleus, plastid	23.76	27.02
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	2.84	26.67
GSMUA_Achr8P11920_001	Banana	cytosol	10.99	25.91
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	9.57	23.89
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	10.52	23.73
GSMUA_Achr11P...	Banana	mitochondrion	5.56	23.62
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	12.77	23.53
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	12.06	23.29
GSMUA_Achr3P14930_001	Banana	cytosol	10.4	23.22
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	10.87	22.77
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	11.23	22.46
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	10.52	22.42
GSMUA_AchrUn_...	Banana	cytosol	9.93	22.16
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	11.11	21.91
GSMUA_Achr10P...	Banana	cytosol	11.35	21.77
GSMUA_Achr8P26800_001	Banana	cytosol	9.46	21.39
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	9.93	21.0
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	9.93	20.69
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	9.22	20.69
GSMUA_Achr9P06040_001	Banana	cytosol	9.34	20.57
GSMUA_Achr4P30750_001	Banana	mitochondrion	6.5	20.52
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	13.0	19.86
GSMUA_Achr8P26180_001	Banana	mitochondrion	12.29	19.81
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	8.63	19.78
GSMUA_Achr2P15790_001	Banana	cytosol	13.36	19.72
GSMUA_AchrUn_...	Banana	mitochondrion	11.11	18.58
GSMUA_Achr8P19690_001	Banana	mitochondrion	6.03	18.55
GSMUA_Achr3P17450_001	Banana	nucleus	9.57	18.04
CDX75112	Canola	cytosol	1.65	10.07
HORVU2Hr1G124440.1	Barley	cytosol	0.35	4.92

Protein Annotations

EnsemblPlants:GSMUA_Achr7P06540_001	EnsemblPlants:GSMUA_Achr7T06540_001	EnsemblPlantsGene:GSMUA_Achr7G06540_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16
PFAM:PF00612	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0002948E99
UniProt:M0TF94	MapMan:35.1	:	:	:	:

Description

Putative Protein IQ-DOMAIN 32 [Source:GMGC_GENE;Acc:GSMUA_Achr7G06540_001]

Coordinates

chr7:+:4802041..4809559

Molecular Weight (calculated)

92631.0 Da

IEP (calculated)

7.476

GRAVY (calculated)

-0.713

Length

846 amino acids

Sequence
(BLAST)

001: MTGGTCLCFS IYLINSCKIS SCNHRSIIAQ RYLLQSEKIL EVGFFHSFVC SKRNRVIIVF KFVAGDANQI VKMKGDIGRR EGAMGKPSSS CFKIIGCGGG
101: DAIDDDDDLG PEEAKASSDK HRWSFYKRSS KHRVLSNTVI SEPVSICSSK QSQEVTITNF HSPKYAYPEK VQIQERPIET SPLPSEIVST EAPPSSSNRS
201: TDTVGPAINE SDAVIVQSAI RGYLARKKLL KLKSVVKLQA AVRGHLVRRQ AIETFRCIQA IIRMQALVRD HHARQLGDYF EKSKTSIEKL LSNKLARQLL
301: ETTPRSKTIY IKCEPLKSDS AWKWLERWMA VTSSGLSQQH EENLNQDSCA LDGNAKMADD DSATEITHSD SSALSDSKLA PTELVMTDDG KNSLTTESIG
401: SFGFQNPGIA PDKSSKSLGE SDFENKELKN EVLNITMSSE ILVDSVPDKL ECKVNSNHTN ESASSETLEN EGKKSVIGPR KPRNPAFAAA QSKFEELSSV
501: STVGRSVSPV YQTAVSKSET ESNNIRVDSF TNNNEAISAE KSMWQDSRVE AEISEFGTEL SVSSMLDSLD RSEMESGEVV ETGALEKHNN SFSADAENPI
601: DISDFCGNEN DSRLTSDITV PQRPHGGDQT MANMNASTGV VQVDQHPAES TTSDMQSHLE GMTEQARSPE GTPRGHVAMP DLHGTPSSDV SVNAKKSKKD
701: NNLPTHRQRS NLVGKRLPCN PNNDSGGRSS SENSTKDSKV PKRRNSLGMA KTEHVDQEPR LSSSNSLPGY MQATASARAK AHVSTPPKSS PDVHDNQPKK
801: RHSLPIENGK QSSSPRMQRS ASQAQKTGNS NGVHSPHNSA ERRWQR

Best Arabidopsis Sequence Match ( AT1G19870.2 )
(BLAST)

001: MASKVEPEES ESDDVIIVRK ESDEKVDEKL DESVIVVIQA AVRGFLARRE LLRSKKVIKL QAAVRGHLVR SQAMGSLRCV QAIVKMQAMV RARHSTKDGS
101: RVSATSDKSE PNAAAQKLLE NKFAKHLMES TPKTKPINIK CDPTKPSSAW NWLERWMSVP KPEKTSKANL TTEEQNLEET QNVKISPQAD FVNSDSTVEN
201: KTETDMPSYE ASKVEGQNVE LSETEKMSQY DSPEASAEVY YDSIQSQPLA AKPDSLLEEP EYVDGQIKHS LKRKVSNPSF IAAQSKFEEL TSSTGSNKAM
301: TLSSKDDVLG EEGKTDIDSP DTTNTIKDHS LEDVTPAELS GSECGTELSV TSSLDTLEKK SDAEGAEPRV EAKLLEDDTF KTDQAELIEI DVKDATSMGT
401: VEDPKEKVEN AKDEVEISAT HHEPVISTPD SKKRRAEDES GPQAYALSEG ALTPMTITES QATPASQASS SVKARKGKSE KSGSSQKRKV SKKITSSPKQ
501: EIGTGEATEQ EEGKEQKSGR RTSFGYDQEA RESSGGKNSL PRFMQPTQSA KAKVQEHNSP RSSPDLQERD VVSAKKRHSL PGVTNGKQVS PRIQRSASQA
601: QQGTKDRKWQ R

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.