Factsheet for TraesCS2B01G520500.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G492300.1	Wheat	nucleus	95.68	95.24
TraesCS2D01G492600.1	Wheat	nucleus	95.57	95.12
HORVU2Hr1G109850.3	Barley	nucleus	76.31	91.47
Os04t0663100-01	Rice	plasma membrane	67.56	64.84
EES11606	Sorghum	nucleus	63.83	61.74
Zm00001d026535_P003	Maize	nucleus	60.79	57.82
Zm00001d001953_P003	Maize	nucleus	61.03	57.03
GSMUA_Achr3P11240_001	Banana	nucleus	31.97	35.08
VIT_18s0001g13870.t01	Wine grape	nucleus	31.97	34.6
GSMUA_Achr1P06080_001	Banana	nucleus	30.46	33.5
GSMUA_Achr1P19900_001	Banana	cytosol	9.1	33.48
GSMUA_Achr1P19910_001	Banana	nucleus	22.17	31.77
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	31.27	31.68
Solyc04g081210.2.1	Tomato	nucleus	30.81	30.63
PGSC0003DMT400009545	Potato	nucleus	30.92	30.53
KRH51729	Soybean	cytosol	28.24	28.5
CDX83739	Canola	nucleus	24.5	28.42
Bra016490.1-P	Field mustard	nucleus	24.39	28.28
CDY62588	Canola	nucleus	24.39	28.21
CDY44186	Canola	nucleus, plastid	23.92	28.04
Bra025777.1-P	Field mustard	nucleus, plastid	24.15	27.82
CDY29389	Canola	nucleus, plastid	24.15	27.67
AT1G19870.1	Thale cress	nucleus	24.27	26.2
KRH61064	Soybean	nucleus	20.54	24.21
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	11.9	22.17
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	10.85	21.33
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	8.28	20.94
TraesCS1B01G142100.1	Wheat	cytosol	10.97	20.7
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	13.89	20.55
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	10.97	20.35
TraesCS3B01G309600.1	Wheat	mitochondrion	8.87	20.16
TraesCS3B01G127100.1	Wheat	cytosol	10.74	19.87
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	10.62	18.88
TraesCS3B01G276000.1	Wheat	cytosol, plastid	11.9	18.61
TraesCS5B01G160400.1	Wheat	cytosol	10.04	18.07
TraesCS7B01G244900.1	Wheat	cytosol	7.82	15.12
TraesCS4B01G330700.1	Wheat	mitochondrion	4.2	9.09
CDX75112	Canola	cytosol	1.4	8.63

Protein Annotations

EnsemblPlants:TraesCS2B01G520500.3	EnsemblPlantsGene:TraesCS2B01G520500	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	PFAM:PF00612	PFscan:PS50096
SEG:seg	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:715028665..715033458

Molecular Weight (calculated)

94235.7 Da

IEP (calculated)

4.765

GRAVY (calculated)

-0.843

Length

857 amino acids

Sequence
(BLAST)

001: MTKSKNGCLK ILCGGAGSDA TAGSDPETDA HADESKAISD KSRWSFRRRS TRHRVLKNSD ISEPETLSSS KAKADVAPSN NVYSSTYSYA SEKPLHLEKP
101: DEKIVLQEKP DEKSVHEEKP DEKQTEKTTE KPVDQIIERS IEQPDEKITE MLSEEPAEKD VEKLDEKPDE SISVSPTEVK QDETATLVDR SVPDPEEDHV
201: ESAAIVIQSG IRTYNARQEL SNHKDLVKLQ AVIRGHLVRR QAAESLQCLL AIVKTQGLVR THQAQQSSGR FQDTLVRSSS EKLLHNGFAL KLMDNMSTSK
301: SMNIRCDASE TDATWKWMER WTTLILPTTE GHLIENAENS GLVVEKMEED AHHEEKVVLS ESDISFPKLV PDDVEETLRP SESSAFVEET PRSFDLSGLK
401: APECVPEETS MLEIKDDPAP EFIEKVDDDA EQLTDSKTEN VVEQSLDFST QTDPSREPSP VPEKSEYPSE DVMDAYNLEQ SLEMEARSAA RKACNPAFAA
501: AQMKFEELTS AVSRSNSSSF LDAPSKSKVH TPRSQGGTSP KQNIETVIPG STVGHDAKII PAASECGTEI SISSTLDSPD RSEADGGEIV MEMGALGGRN
601: YASENAEKDT HVLHSEVKDT SEEVVQPEKE EELNGDVANP PIATDPVLEQ AHVESGKPDL HDQIEESIGS YAKSPEGTPM SRTTFAESQC TPSSEVSVNT
701: NKSKSKSKKS KSHASRRSLT SPSSNSVGRS STDNLSKDYK HAKRESSGKV AKSDNADQEP RMSNSTPLPS YMQFTESARA KAAALSPKLS PDVQDNNPRK
801: RHSLPITNGK NETSPRMQRS SSQAQQNVKS SVAVPHNPSV YVCLKDLLMC TDKRWNI

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.