Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G492600.1 | Wheat | nucleus | 93.57 | 77.7 |
| TraesCS2A01G492300.1 | Wheat | nucleus | 93.57 | 77.7 |
| TraesCS2B01G520500.3 | Wheat | nucleus | 91.47 | 76.31 |
| Os04t0663100-01 | Rice | plasma membrane | 65.87 | 52.74 |
| EES11606 | Sorghum | nucleus | 61.82 | 49.89 |
| Zm00001d026535_P003 | Maize | nucleus | 59.3 | 47.06 |
| Zm00001d001953_P003 | Maize | nucleus | 59.3 | 46.24 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 11.75 | 23.08 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 15.1 | 18.34 |
| HORVU2Hr1G106550.2 | Barley | mitochondrion | 10.07 | 16.59 |
| HORVU3Hr1G070750.1 | Barley | mitochondrion | 5.73 | 16.4 |
| HORVU3Hr1G070760.1 | Barley | mitochondrion | 8.53 | 16.09 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 10.49 | 16.03 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 12.45 | 16.01 |
| HORVU4Hr1G073480.2 | Barley | cytosol, mitochondrion | 9.93 | 15.6 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 10.63 | 14.42 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 8.53 | 14.02 |
| HORVU2Hr1G106540.1 | Barley | cytosol, nucleus | 5.87 | 13.91 |
| HORVU6Hr1G003870.1 | Barley | cytosol, mitochondrion | 5.87 | 13.64 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 10.35 | 13.31 |
| HORVU4Hr1G056380.1 | Barley | cytosol, mitochondrion | 6.15 | 13.17 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 10.07 | 12.57 |
| HORVU1Hr1G075880.4 | Barley | cytosol | 5.59 | 11.59 |
| HORVU2Hr1G124440.1 | Barley | cytosol | 0.7 | 8.2 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 3.92 | 7.2 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G109850.3 | EnsemblPlantsGene:HORVU2Hr1G109850 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF16 | PFAM:PF00612 | PFscan:PS50096 |
| SEG:seg | UniParc:UPI000B46C067 | UniProt:A0A287JET0 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:718208907..718212628
Molecular Weight (calculated)
77915.5 Da
IEP (calculated)
4.601
GRAVY (calculated)
-0.838
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MEITETPSKE PAERMPEKPV EEPAEEDVEK LDEKPDESIS VSATEVKQDE TASLVDSSIP DPEEDHVESA AIVIQSGIRT YNAKQELSNH KDLVKLQAVI
101: RGHLVRRQAA ESLQCLLAIV KTQGLVRTHQ AQQSSGRFQQ DTLVRSSSEK LLHNGFALKL MDSMSTSKSM NIRCDASETD ATWKWMERWT TLILPTTEGH
201: LLENAENSGL VVEKMEEDAQ HEEKAVPLDS DISFPKLAPD DVEETLRPSD SSAFVEETLR SSDSSGLEAP DRDPEETSLL EIKCDSAPEL IEKVDDDAEQ
301: LTDSKTENVV EQSFDFSGQQ STQTNPSREP SPVPEKSEYP SEDVMGNLEQ SPEMEARSAA RKACNPAFAA AQMKFEELTS AVSRSNSSSF LDAPSKPKVH
401: TPRSLGGTSP KQNIETVVPG SAVGHDAKII PAASECGTEI SISSTLDSPD RSEADGGEIV MEMGALGGRN YASENAEKDT HVLHSEVKDT SEEVVQPEKE
501: EELNGDVPNP AIATDPVLDQ AHVGSGKPDL HDQIEESIGS YAKSPEGTPM SRTTFAESQC TPSSEVSVNT NKSKSKSKKS KSHASRRSLT SPSSNSVGRS
601: STDNLSKDYK HAKRESSGKV AKSENADQEP RMSNSTPLPS YMQFTESARA KAAALSPKLS PDVQDNNPRK RHSLPITNGK NETSPRMQRS SSQAQQNVKS
701: SVAVPHNPSD KRWNI
101: RGHLVRRQAA ESLQCLLAIV KTQGLVRTHQ AQQSSGRFQQ DTLVRSSSEK LLHNGFALKL MDSMSTSKSM NIRCDASETD ATWKWMERWT TLILPTTEGH
201: LLENAENSGL VVEKMEEDAQ HEEKAVPLDS DISFPKLAPD DVEETLRPSD SSAFVEETLR SSDSSGLEAP DRDPEETSLL EIKCDSAPEL IEKVDDDAEQ
301: LTDSKTENVV EQSFDFSGQQ STQTNPSREP SPVPEKSEYP SEDVMGNLEQ SPEMEARSAA RKACNPAFAA AQMKFEELTS AVSRSNSSSF LDAPSKPKVH
401: TPRSLGGTSP KQNIETVVPG SAVGHDAKII PAASECGTEI SISSTLDSPD RSEADGGEIV MEMGALGGRN YASENAEKDT HVLHSEVKDT SEEVVQPEKE
501: EELNGDVPNP AIATDPVLDQ AHVGSGKPDL HDQIEESIGS YAKSPEGTPM SRTTFAESQC TPSSEVSVNT NKSKSKSKKS KSHASRRSLT SPSSNSVGRS
601: STDNLSKDYK HAKRESSGKV AKSENADQEP RMSNSTPLPS YMQFTESARA KAAALSPKLS PDVQDNNPRK RHSLPITNGK NETSPRMQRS SSQAQQNVKS
701: SVAVPHNPSD KRWNI
001: MASKVEPEES ESDDVIIVRK ESDEKVDEKL DESVIVVIQA AVRGFLARRE LLRSKKVIKL QAAVRGHLVR SQAMGSLRCV QAIVKMQAMV RARHSTKDGS
101: RVSATSDKSE PNAAAQKLLE NKFAKHLMES TPKTKPINIK CDPTKPSSAW NWLERWMSVP KPEKTSKANL TTEEQNLEET QNVKISPQAD FVNSDSTVEN
201: KTETDMPSYE ASKVEGQNVE LSETEKMSQY DSPEASAEVY YDSIQSQPLA AKPDSLLEEP EYVDGQIKHS LKRKVSNPSF IAAQSKFEEL TSSTGSNKAM
301: TLSSKDDVLG EEGKTDIDSP DTTNTIKDHS LEDVTPAELS GSECGTELSV TSSLDTLEKK SDAEGAEPRV EAKLLEDDTF KTDQAELIEI DVKDATSMGT
401: VEDPKEKVEN AKDEVEISAT HHEPVISTPD SKKRRAEDES GPQAYALSEG ALTPMTITES QATPASQASS SVKARKGKSE KSGSSQKRKV SKKITSSPKQ
501: EIGTGEATEQ EEGKEQKSGR RTSFGYDQEA RESSGGKNSL PRFMQPTQSA KAKVQEHNSP RSSPDLQERD VVSAKKRHSL PGVTNGKQVS PRIQRSASQA
601: QQGTKDRKWQ R
101: RVSATSDKSE PNAAAQKLLE NKFAKHLMES TPKTKPINIK CDPTKPSSAW NWLERWMSVP KPEKTSKANL TTEEQNLEET QNVKISPQAD FVNSDSTVEN
201: KTETDMPSYE ASKVEGQNVE LSETEKMSQY DSPEASAEVY YDSIQSQPLA AKPDSLLEEP EYVDGQIKHS LKRKVSNPSF IAAQSKFEEL TSSTGSNKAM
301: TLSSKDDVLG EEGKTDIDSP DTTNTIKDHS LEDVTPAELS GSECGTELSV TSSLDTLEKK SDAEGAEPRV EAKLLEDDTF KTDQAELIEI DVKDATSMGT
401: VEDPKEKVEN AKDEVEISAT HHEPVISTPD SKKRRAEDES GPQAYALSEG ALTPMTITES QATPASQASS SVKARKGKSE KSGSSQKRKV SKKITSSPKQ
501: EIGTGEATEQ EEGKEQKSGR RTSFGYDQEA RESSGGKNSL PRFMQPTQSA KAKVQEHNSP RSSPDLQERD VVSAKKRHSL PGVTNGKQVS PRIQRSASQA
601: QQGTKDRKWQ R
Arabidopsis Description
IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.