Factsheet for HORVU6Hr1G003870.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	79.55	73.35
HORVU2Hr1G106550.2	Barley	mitochondrion	83.77	59.45
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	80.19	56.91
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	80.52	56.75
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	80.19	56.65
Os10t0420200-01	Rice	mitochondrion	45.78	41.47
Zm00001d032932_P001	Maize	mitochondrion	54.55	39.25
OQU91764	Sorghum	mitochondrion, plastid	56.82	34.65
GSMUA_Achr4P21190_001	Banana	cytosol	18.83	28.86
HORVU4Hr1G073480.2	Barley	cytosol, mitochondrion	41.88	28.35
HORVU2Hr1G106540.1	Barley	cytosol, nucleus	27.27	27.81
HORVU5Hr1G093430.4	Barley	cytosol	36.04	23.72
HORVU3Hr1G070750.1	Barley	mitochondrion	19.16	23.6
Solyc09g082560.2.1	Tomato	nucleus	35.39	23.34
HORVU3Hr1G070760.1	Barley	mitochondrion	21.75	17.68
HORVU0Hr1G005320.2	Barley	cytosol	20.78	17.58
HORVU1Hr1G075880.4	Barley	cytosol	18.83	16.81
HORVU1Hr1G028250.6	Barley	mitochondrion	28.25	16.51
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	27.92	15.01
PGSC0003DMT400016500	Potato	nucleus	11.69	13.53
HORVU7Hr1G082120.1	Barley	cytosol	17.21	12.18
HORVU5Hr1G050840.5	Barley	cytosol, plastid	20.45	11.33
HORVU4Hr1G081190.1	Barley	mitochondrion	12.66	10.03
HORVU1Hr1G080360.4	Barley	mitochondrion	17.53	9.17
HORVU3Hr1G067750.8	Barley	cytosol, plastid	14.94	8.27
HORVU2Hr1G109850.3	Barley	nucleus	13.64	5.87
HORVU2Hr1G124440.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G003870.1	EnsemblPlantsGene:HORVU6Hr1G003870	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF91	PFscan:PS50096	SEG:seg	UniParc:UPI000B46D86F
UniProt:A0A287T694	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:8440905..8447554

Molecular Weight (calculated)

33801.3 Da

IEP (calculated)

10.169

GRAVY (calculated)

-0.541

Length

308 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS ILAGKKDGGR RGDKRGQSRC DSTPLGELPV AASPREKRQW SFRRPALPVK TAATPSPLAL EPGGLSVSVA VAVSERELEE SKHAVAVAMA
101: AADAAVIRLT PPESDNNLNL YATPFQEAAA ARIEATCNAD ARKALCALRG LVKLQALIRG HLVKKQARAT LRRLQDLLMA QTGVRAQRMR MLEDEDHAAA
201: APVDHWSPQH PRRRRSYEMD RSGEEHAKIV EMDMGEPSRR GRSSCSVAAS EPWSREGRRT DYYDPGQCLL ASSAAITEIT SPRAYNVRFE DFEPATERTC
301: RLGLRAAV

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.