Factsheet for TraesCS2B01G492900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	94.5	94.93
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	94.04	93.82
HORVU2Hr1G106550.2	Barley	mitochondrion	91.51	91.94
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	56.65	80.19
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	59.4	77.54
Os10t0420200-01	Rice	mitochondrion	49.77	63.82
Zm00001d032932_P001	Maize	mitochondrion	62.39	63.55
OQU91764	Sorghum	mitochondrion, plastid	64.22	55.45
GSMUA_Achr4P21190_001	Banana	cytosol	23.17	50.25
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	48.39	43.78
PGSC0003DMT400016500	Potato	nucleus	26.38	43.23
Solyc09g082560.2.1	Tomato	nucleus	44.95	41.97
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	42.89	40.48
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	30.28	28.7
TraesCS1B01G142100.1	Wheat	cytosol	29.36	28.19
TraesCS3B01G127100.1	Wheat	cytosol	28.9	27.21
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	21.1	27.14
TraesCS3B01G309600.1	Wheat	mitochondrion	22.02	25.46
TraesCS5B01G160400.1	Wheat	cytosol	23.62	21.64
TraesCS7B01G244900.1	Wheat	cytosol	20.41	20.09
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	20.41	15.37
TraesCS3B01G276000.1	Wheat	cytosol, plastid	16.51	13.14
TraesCS4B01G330700.1	Wheat	mitochondrion	10.55	11.62
TraesCS2B01G520500.3	Wheat	nucleus	21.33	10.85

Protein Annotations

EnsemblPlants:TraesCS2B01G492900.1	EnsemblPlantsGene:TraesCS2B01G492900	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF91	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr2B:-:690907625..690909363

Molecular Weight (calculated)

47529.1 Da

IEP (calculated)

10.676

GRAVY (calculated)

-0.663

Length

436 amino acids

Sequence
(BLAST)

001: MGKAGRWLRS ILAGKRDGGR RGGKRGQSQC DSAPLAELPA AASPREKRRW SFRRPAAAVK PAAAPSPLAQ EAGGLSVSVS ERELEQSKHA VAVTMAAADA
101: AVIHLTAPEA EDDLNLYATP VQEAAAARIQ ATFRGYLARK ALCAQRGLVK LQALIRGHLV RKQARATLRR MQALLMAQTR VRAQRMRMLE EEDNAAAAGP
201: VDRRSPQHPR RRRSYEMDRS GEEHAKIVEM DMGEPPRRGR SSCSVAASEP WSTERRRAEY YGPGQCSPAP SAAFTEITSP RAYSGHFEDF EPATARVSAY
301: VPAGYADEGE SASEFFPNYM ANTQSSRAKA RSQSAPKQRP DSPSPLERQP SRRRSGPAPL PRSVKMQRSS SHVGVPMPSS AAAMYAQHYP WSVKLDRSSA
401: SLHESECGST SSVLTAATTV GYSRSMVGFE VHRSQY

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.