Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G387500.1 | Wheat | cytosol | 97.4 | 97.19 |
| TraesCS5A01G377500.1 | Wheat | cytosol | 96.75 | 96.75 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 97.19 | 95.94 |
| Os03t0636700-00 | Rice | mitochondrion | 71.0 | 73.38 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 70.56 | 68.92 |
| EER93770 | Sorghum | cytosol, mitochondrion | 71.86 | 67.76 |
| GSMUA_Achr3P14930_001 | Banana | cytosol | 40.91 | 49.87 |
| GSMUA_Achr8P26800_001 | Banana | cytosol | 39.83 | 49.2 |
| CDY50677 | Canola | nucleus | 36.8 | 46.2 |
| Bra039715.1-P | Field mustard | nucleus, plastid | 36.8 | 45.95 |
| CDY36861 | Canola | nucleus | 37.01 | 45.72 |
| VIT_05s0020g03980.t01 | Wine grape | cytosol | 43.94 | 43.75 |
| TraesCS2B01G492900.1 | Wheat | cytosol, mitochondrion | 40.48 | 42.89 |
| CDY29768 | Canola | cytosol | 15.37 | 42.52 |
| KRH35475 | Soybean | cytosol | 42.86 | 42.22 |
| Bra036898.1-P | Field mustard | cytosol | 33.33 | 42.08 |
| KRH69109 | Soybean | nucleus | 37.45 | 41.49 |
| KRG91354 | Soybean | cytosol, plastid | 41.99 | 41.45 |
| CDY64325 | Canola | cytosol | 32.68 | 40.48 |
| KRH31669 | Soybean | cytosol, mitochondrion | 36.58 | 39.95 |
| TraesCS4B01G277100.2 | Wheat | cytosol, mitochondrion | 39.83 | 38.17 |
| AT4G14750.3 | Thale cress | cytosol | 36.58 | 36.74 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 26.62 | 31.46 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 30.74 | 30.87 |
| TraesCS1B01G354600.1 | Wheat | cytosol, mitochondrion | 21.64 | 29.5 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 28.79 | 28.73 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 27.92 | 28.41 |
| KRH68719 | Soybean | cytosol | 22.08 | 27.27 |
| KRG96957 | Soybean | cytosol | 21.21 | 26.49 |
| TraesCS3B01G309600.1 | Wheat | mitochondrion | 21.21 | 25.99 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 22.73 | 22.06 |
| TraesCS7B01G244900.1 | Wheat | cytosol | 19.91 | 20.77 |
| TraesCS1B01G374100.2 | Wheat | cytosol, mitochondrion | 19.05 | 15.2 |
| TraesCS3B01G276000.1 | Wheat | cytosol, plastid | 16.45 | 13.87 |
| TraesCS4B01G330700.1 | Wheat | mitochondrion | 11.26 | 13.13 |
| TraesCS2B01G520500.3 | Wheat | nucleus | 20.35 | 10.97 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G381100.1 | EnsemblPlantsGene:TraesCS5B01G381100 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF37 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5B:-:558870570..558872148
Molecular Weight (calculated)
49427.3 Da
IEP (calculated)
10.988
GRAVY (calculated)
-0.525
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAGRWLRS FLPGKKDRGR DAGDHKTGPE ETPRWVPAWS SQAVTPASTP GVKEKRRWSF RRPATAVGAG AGKDGAFLEP RVLDPDQSAI AVAIATAAAA
101: EAAVAAKQAA AAVVRYAASA PGSKRTVIGI EEAAAIKIQS VFRSYLARKA LCALRGLVKL QALVRGHLVR RQASNTLRCM QALVAAQNRA RTARLRLLDD
201: ERPLRTPRMT PTRRSPHHPR LRQHQETEEN IKIVEVDTGA GDVHCTPRTS RRSSCYATPL CRTPSKVELY QKVSPTPSAL TDASGRSYSG RYEDFSFGTA
301: RASPYHYYYA SDASCKQPPP PQQQGHGAGA GADHPLLFPS YMANTQSSRA KARSQSAPRQ RASVSSAPEA ASPWERQASA GRRRASLEGP AQAAARGLAS
401: PKGAVRVQRC QSQASAACPW GVRLDMSSAS VHDSECGSTS TMRTAATSMY CWSAAANSTG VA
101: EAAVAAKQAA AAVVRYAASA PGSKRTVIGI EEAAAIKIQS VFRSYLARKA LCALRGLVKL QALVRGHLVR RQASNTLRCM QALVAAQNRA RTARLRLLDD
201: ERPLRTPRMT PTRRSPHHPR LRQHQETEEN IKIVEVDTGA GDVHCTPRTS RRSSCYATPL CRTPSKVELY QKVSPTPSAL TDASGRSYSG RYEDFSFGTA
301: RASPYHYYYA SDASCKQPPP PQQQGHGAGA GADHPLLFPS YMANTQSSRA KARSQSAPRQ RASVSSAPEA ASPWERQASA GRRRASLEGP AQAAARGLAS
401: PKGAVRVQRC QSQASAACPW GVRLDMSSAS VHDSECGSTS TMRTAATSMY CWSAAANSTG VA
001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.