Factsheet for VIT_14s0030g01880.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
peroxisome 1
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68719	Soybean	cytosol	34.53	36.1
KRG96957	Soybean	cytosol	34.02	35.95
CDY29768	Canola	cytosol	15.35	35.93
VIT_00s0684g00020.t01	Wine grape	mitochondrion	11.0	31.39
GSMUA_Achr3P14930_001	Banana	cytosol	29.92	30.87
CDY36861	Canola	nucleus	29.41	30.75
Bra039715.1-P	Field mustard	nucleus, plastid	28.9	30.54
CDY50677	Canola	nucleus	28.64	30.43
GSMUA_Achr8P26800_001	Banana	cytosol	28.39	29.68
Bra036898.1-P	Field mustard	cytosol	27.62	29.51
CDY64325	Canola	cytosol	27.62	28.95
VIT_05s0020g03980.t01	Wine grape	cytosol	33.25	28.02
Os03t0636700-00	Rice	mitochondrion	31.2	27.29
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	31.46	26.62
TraesCS5D01G387500.1	Wheat	cytosol	31.46	26.57
TraesCS5A01G377500.1	Wheat	cytosol	30.95	26.19
Zm00001d033280_P001	Maize	cytosol, mitochondrion	31.46	26.0
HORVU5Hr1G093430.4	Barley	cytosol	30.95	25.85
EER93770	Sorghum	cytosol, mitochondrion	32.23	25.71
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	26.09	25.37
AT4G14750.3	Thale cress	cytosol	29.16	24.78
TraesCSU01G074100.1	Wheat	cytosol, mitochondrion	24.81	24.37
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	24.55	23.88
VIT_11s0016g03030.t01	Wine grape	cytosol	25.58	22.99
Os12t0604500-00	Rice	cytosol	26.09	22.87
Zm00001d041437_P001	Maize	cytosol, mitochondrion	25.83	22.8
OQU79535	Sorghum	cytosol, mitochondrion	25.58	21.6
VIT_02s0025g04120.t01	Wine grape	mitochondrion	27.11	21.46
VIT_16s0100g00620.t01	Wine grape	cytosol	17.39	20.42
VIT_08s0007g05960.t01	Wine grape	cytosol	20.97	19.29
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	22.76	18.98
VIT_08s0007g05980.t01	Wine grape	cytosol	19.69	17.04
VIT_14s0108g00150.t01	Wine grape	nucleus	21.48	14.53
VIT_01s0026g01790.t01	Wine grape	cytosol	20.72	14.01
VIT_17s0000g05840.t01	Wine grape	endoplasmic reticulum, extracellular	21.23	13.32
VIT_18s0001g13870.t01	Wine grape	nucleus	19.44	9.6

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100245132	wikigene:100245132	MapMan:35.2	ProteinID:CBI34191	ProteinID:CBI34191.3
UniProt:D7TUL6	InterPro:DUF4005	EMBL:FN596249	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EntrezGene:LOC100245132	wikigene:LOC100245132	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF49	SMART:SM00015	TIGR:TC66707	UniParc:UPI0001984A42
ArrayExpress:VIT_14s0030g01880	EnsemblPlantsGene:VIT_14s0030g01880	EnsemblPlants:VIT_14s0030g01880.t01	unigene:Vvi.9777	RefSeq:XP_002272851	RefSeq:XP_002272851.2
RefSeq:XP_002272851.3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:-:6781976..6784193

Molecular Weight (calculated)

43678.9 Da

IEP (calculated)

10.479

GRAVY (calculated)

-0.689

Length

391 amino acids

Sequence
(BLAST)

001: MGKAGRWIRS LLGGKKEEKY KKKYGSFSGE NVEISTAIVP VTPKEKRRWS FGHKSSRALG SIVFPPLVNE GSPKQKNEQS FGMAVAVAAT ATAQTTMAET
101: NGAGKHSEVE HAAATKIQAI FRSYLARKAL CALRGLVKLQ ALVRGHQVRK QANTTLRRMH ALMAIQVRAR VQRIQVAEEA QIVVNRQSSV HRNFHQDNWL
201: RIGLGEKIKV NQDGTQGDSN NRHGFLNYSQ IQRIEQGIIK YYSGELTPHH DSPMYRSNST RKSFCFPQAD CHADSSPHYP FLPNYMANTE CSKAKARSQS
301: EPKQRPKWGN KQKSRQTTLV GEASGSQHVQ RQHPTSHAGS ISIENPEPWL IKLYQSTMAL KDSECDSNST VTSTSNYCTP AVAYEPHVTM F

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.