Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036898.1-P | Field mustard | cytosol | 94.61 | 43.17 |
| CDY64325 | Canola | cytosol | 90.42 | 40.48 |
| CDX90650 | Canola | mitochondrion | 22.75 | 36.89 |
| CDY29016 | Canola | mitochondrion | 22.16 | 35.92 |
| CDY50677 | Canola | nucleus | 77.25 | 35.05 |
| CDY36861 | Canola | nucleus | 77.84 | 34.76 |
| CDX73724 | Canola | mitochondrion | 23.35 | 30.0 |
| AT4G14750.3 | Thale cress | cytosol | 73.65 | 26.74 |
| CDX78003 | Canola | mitochondrion | 23.95 | 26.32 |
| GSMUA_Achr8P26800_001 | Banana | cytosol | 44.31 | 19.79 |
| GSMUA_Achr3P14930_001 | Banana | cytosol | 43.11 | 19.0 |
| KRH68719 | Soybean | cytosol | 38.32 | 17.11 |
| KRG96957 | Soybean | cytosol | 36.53 | 16.49 |
| CDY46537 | Canola | cytosol, mitochondrion | 28.14 | 16.21 |
| CDY53440 | Canola | mitochondrion | 28.14 | 16.21 |
| CDY72577 | Canola | cytosol, mitochondrion | 28.14 | 16.21 |
| TraesCS5A01G377500.1 | Wheat | cytosol | 43.11 | 15.58 |
| TraesCS5A01G055100.1 | Wheat | cytosol, mitochondrion | 37.13 | 15.42 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 43.11 | 15.38 |
| TraesCS5B01G381100.1 | Wheat | cytosol, mitochondrion | 42.52 | 15.37 |
| VIT_14s0030g01880.t01 | Wine grape | nucleus | 35.93 | 15.35 |
| TraesCSU01G074100.1 | Wheat | cytosol, mitochondrion | 36.53 | 15.33 |
| TraesCS5D01G387500.1 | Wheat | cytosol | 41.92 | 15.12 |
| CDX78285 | Canola | plastid | 31.14 | 15.12 |
| Zm00001d033280_P001 | Maize | cytosol, mitochondrion | 42.52 | 15.01 |
| Os03t0636700-00 | Rice | mitochondrion | 40.12 | 14.99 |
| EER93770 | Sorghum | cytosol, mitochondrion | 43.71 | 14.9 |
| CDX70272 | Canola | cytosol, mitochondrion | 25.75 | 14.68 |
| CDY45643 | Canola | cytosol | 28.14 | 14.42 |
| CDY41423 | Canola | cytosol, mitochondrion | 25.15 | 14.33 |
| CDY04907 | Canola | endoplasmic reticulum | 28.14 | 14.03 |
| CDY14162 | Canola | endoplasmic reticulum | 28.14 | 14.03 |
| CDX98994 | Canola | mitochondrion | 29.34 | 13.84 |
| CDX70019 | Canola | cytosol, mitochondrion | 29.34 | 13.84 |
| CDY43103 | Canola | cytosol | 29.94 | 13.59 |
| Os12t0604500-00 | Rice | cytosol | 35.93 | 13.45 |
| CDX82400 | Canola | cytosol | 29.94 | 13.4 |
| CDX75883 | Canola | cytosol | 29.94 | 13.33 |
| CDY00253 | Canola | plastid | 31.14 | 13.2 |
| CDX92076 | Canola | cytosol | 30.54 | 13.18 |
| CDX81042 | Canola | plastid | 30.54 | 13.18 |
| Zm00001d041437_P001 | Maize | cytosol, mitochondrion | 34.73 | 13.09 |
| CDX86928 | Canola | mitochondrion, plastid | 30.54 | 12.94 |
| CDY41368 | Canola | mitochondrion, plastid | 32.34 | 12.86 |
| CDX76341 | Canola | mitochondrion, plastid | 32.34 | 12.86 |
| CDY68636 | Canola | cytosol | 29.94 | 12.85 |
| CDY41417 | Canola | mitochondrion | 22.75 | 12.71 |
| CDY00251 | Canola | plastid | 31.14 | 12.65 |
| CDY30233 | Canola | mitochondrion | 29.34 | 12.63 |
| CDY67178 | Canola | cytosol, mitochondrion | 29.34 | 12.63 |
| CDY47784 | Canola | mitochondrion | 28.74 | 12.37 |
| CDY41252 | Canola | cytosol, mitochondrion | 35.33 | 12.09 |
| CDX98786 | Canola | nucleus | 34.13 | 12.0 |
| CDY53133 | Canola | nucleus | 34.73 | 11.93 |
| OQU79535 | Sorghum | cytosol, mitochondrion | 32.93 | 11.88 |
| CDX94150 | Canola | nucleus | 32.93 | 11.85 |
| CDX85648 | Canola | nucleus | 27.54 | 11.65 |
| CDX91120 | Canola | nucleus | 25.15 | 11.2 |
| CDX78523 | Canola | nucleus | 26.95 | 10.09 |
| CDX70505 | Canola | nucleus | 26.95 | 10.09 |
| CDX98787 | Canola | mitochondrion | 14.97 | 8.45 |
| CDY41676 | Canola | cytosol, plastid | 26.35 | 7.65 |
| CDY03037 | Canola | cytosol | 25.75 | 7.44 |
| CDY67405 | Canola | cytosol | 25.75 | 7.43 |
| CDX83805 | Canola | cytosol, mitochondrion | 24.55 | 7.35 |
| CDY19251 | Canola | cytosol, mitochondrion | 24.55 | 7.32 |
| CDY26720 | Canola | cytosol, mitochondrion | 24.55 | 7.27 |
| CDY45197 | Canola | nucleus, plastid | 24.55 | 7.03 |
| CDY49085 | Canola | cytosol | 23.95 | 6.53 |
| CDY39317 | Canola | cytosol | 23.35 | 6.43 |
| CDY04137 | Canola | cytosol, plastid | 20.96 | 6.22 |
| CDY17427 | Canola | cytosol, plastid | 20.96 | 6.17 |
| CDX96693 | Canola | nucleus | 24.55 | 6.09 |
| CDY04138 | Canola | cytosol, plastid | 20.36 | 6.06 |
| CDX83739 | Canola | nucleus | 25.15 | 5.68 |
| CDY44186 | Canola | nucleus, plastid | 23.95 | 5.47 |
| CDY62588 | Canola | nucleus | 23.95 | 5.4 |
| CDY29389 | Canola | nucleus, plastid | 23.35 | 5.21 |
| CDX75112 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY29768 | EnsemblPlantsGene:GSBRNA2T00043624001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF45 | PFAM:PF00612 | PFscan:PS50096 |
| ProteinID:CDY29768 | ProteinID:CDY29768.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EF187D | UniProt:A0A078GYV3 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g18980DBnaA01g18980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYV3]
Coordinates
chrLK032243:+:378444..385578
Molecular Weight (calculated)
18652.8 Da
IEP (calculated)
11.302
GRAVY (calculated)
-0.501
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTSKWIRN FLTGKKERSK EKIIQSECGG FTSPVPGIPK EKRRWSFRRS SAARPPACAS TLKVSSPPAQ PSLPPPPQPF EVANVDTEHD ENKGAEIAMA
101: VEEFAAVKIQ AYYRSHLARK ALRALKGLVK LQALVRGHLV RKQATATLRC MQARLHFRLK LENRGIV
101: VEEFAAVKIQ AYYRSHLARK ALRALKGLVK LQALVRGHLV RKQATATLRC MQARLHFRLK LENRGIV
001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS
Arabidopsis Description
IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.