CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45197	Canola	nucleus, plastid	90.66	89.88
CDY04137	Canola	cytosol, plastid	78.2	80.28
CDY17427	Canola	cytosol, plastid	78.55	80.07
CDY04138	Canola	cytosol, plastid	77.51	79.86
CDY67405	Canola	cytosol	79.07	78.93
CDY41676	Canola	cytosol, plastid	78.2	78.61
AT2G02790.1	Thale cress	cytosol	78.2	71.07
CDY39317	Canola	cytosol	51.73	49.26
CDY49085	Canola	cytosol	50.69	47.8
PGSC0003DMT400045444	Potato	cytosol, plastid	32.7	33.99
Solyc05g007130.2.1	Tomato	cytosol, plastid	32.35	33.94
Os05t0535900-01	Rice	cytosol	33.22	33.45
Zm00001d038838_P001	Maize	mitochondrion	33.05	33.28
CDX90650	Canola	mitochondrion	5.88	33.01
KXG22418	Sorghum	cytosol, plastid	32.7	32.64
KRH74806	Soybean	cytosol, plastid	31.66	32.5
Zm00001d011138_P003	Maize	cytosol, plastid	33.22	32.49
GSMUA_Achr8P26180_001	Banana	mitochondrion	29.24	32.19
CDY29016	Canola	mitochondrion	5.71	32.04
KRH69321	Soybean	cytosol, mitochondrion	30.62	31.44
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	31.31	31.26
GSMUA_AchrUn_...	Banana	mitochondrion	27.16	31.03
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	30.97	30.92
KRH45861	Soybean	plastid	29.24	30.9
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	30.8	30.74
HORVU1Hr1G080360.4	Barley	mitochondrion	31.14	30.56
KRG99144	Soybean	cytosol, plastid	28.89	30.53
KXG33252	Sorghum	cytosol	29.24	30.23
TraesCS3B01G276000.1	Wheat	cytosol, plastid	28.2	29.74
TraesCS3A01G244100.1	Wheat	cytosol, plastid	28.2	29.74
TraesCS3D01G247300.1	Wheat	cytosol, plastid	27.85	29.38
Zm00001d043655_P002	Maize	mitochondrion	29.07	29.22
CDX83805	Canola	cytosol, mitochondrion	28.2	29.21
Os01t0716200-01	Rice	nucleus	28.72	28.92
HORVU3Hr1G067750.8	Barley	cytosol, plastid	27.68	28.78
CDY26720	Canola	cytosol, mitochondrion	27.85	28.55
CDY19251	Canola	cytosol, mitochondrion	27.34	28.21
CDX73724	Canola	mitochondrion	6.06	26.92
CDY29768	Canola	cytosol	7.44	25.75
CDX96693	Canola	nucleus	28.37	24.37
CDX78003	Canola	mitochondrion	6.4	24.34
CDY50677	Canola	nucleus	14.88	23.37
CDY36861	Canola	nucleus	14.71	22.73
CDY53440	Canola	mitochondrion	10.55	21.03
CDY46537	Canola	cytosol, mitochondrion	10.55	21.03
CDY64325	Canola	cytosol	12.98	20.11
CDX70019	Canola	cytosol, mitochondrion	11.76	19.21
CDX98994	Canola	mitochondrion	11.76	19.21
CDY45643	Canola	cytosol	10.55	18.71
CDX85648	Canola	nucleus	12.46	18.23
CDX78285	Canola	plastid	10.73	18.02
CDY43103	Canola	cytosol	11.25	17.66
CDY68636	Canola	cytosol	11.76	17.48
CDX75883	Canola	cytosol	11.25	17.33
CDX91120	Canola	nucleus	11.25	17.33
CDX70505	Canola	nucleus	13.32	17.26
CDX78523	Canola	nucleus	13.32	17.26
CDX82400	Canola	cytosol	11.07	17.16
CDY67178	Canola	cytosol, mitochondrion	11.42	17.01
CDX92076	Canola	cytosol	11.25	16.8
CDX81042	Canola	plastid	10.9	16.28
CDY30233	Canola	mitochondrion	10.9	16.24
CDX86928	Canola	mitochondrion, plastid	10.9	15.99
CDY00253	Canola	plastid	10.9	15.99
CDY47784	Canola	mitochondrion	10.55	15.72
CDY72577	Canola	cytosol, mitochondrion	7.79	15.52
CDY00251	Canola	plastid	10.9	15.33
CDX98787	Canola	mitochondrion	7.79	15.2
CDY41417	Canola	mitochondrion	7.61	14.72
CDY62588	Canola	nucleus	18.51	14.44
CDX83739	Canola	nucleus	18.34	14.34
CDY53133	Canola	nucleus	11.94	14.2
CDX76341	Canola	mitochondrion, plastid	10.21	14.05
CDY44186	Canola	nucleus, plastid	17.47	13.82
CDY41368	Canola	mitochondrion, plastid	10.03	13.81
CDX94150	Canola	nucleus	11.07	13.79
CDY41252	Canola	cytosol, mitochondrion	11.59	13.73
CDX70272	Canola	cytosol, mitochondrion	6.92	13.65
CDX98786	Canola	nucleus	11.07	13.47
CDY41423	Canola	cytosol, mitochondrion	6.75	13.31
CDY29389	Canola	nucleus, plastid	16.95	13.1
CDY14162	Canola	endoplasmic reticulum	7.09	12.24
CDY04907	Canola	endoplasmic reticulum	7.09	12.24
CDX75112	Canola	cytosol	1.56	6.47

Protein Annotations

EnsemblPlants:CDY03037	EnsemblPlantsGene:GSBRNA2T00115368001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF48
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:CDY03037	ProteinID:CDY03037.1	SEG:seg
SMART:SM00015	UniParc:UPI0004EE092D	MapMan:35.1	:	:	:

Description

BnaC07g21900D

Coordinates

chrLK031939:-:534762..537625

Molecular Weight (calculated)

63408.7 Da

IEP (calculated)

10.359

GRAVY (calculated)

-0.948

Length

578 amino acids

Sequence
(BLAST)

001: MGKTPSPGKW IKSLLGKKSS KSSLEKGSEK LISAKKEEHA AKVVKDNNNR VSNLLTNPTP VASSQEVAAT QTLLVPEQQP SRDIEGDEPN ANLESGNDTE
101: ELKLEEAAKK VQAAVRSHQA REEFQKLKGV IKLQAVIRGH LVRRQAVATY SCIWGIVKFQ AFVRGKNARS SETRVQLQKT NTETESSETL QGTNTCSWLE
201: NPTKLSMIDK ILVSSPTALP LKIQYSPEDP NSAKVWLERW TQLQVWAPGP LVVKSLVPKS QTKKRSFQAV EADKGKLKRG IKKPPGGLNT GTSSSSRSTA
301: ENEKPKRTVR KPSTLGKELN DNKSKQSSRR STSAIKEGSS LEVKDEKPRP SLKKAPLSNG VEKHTRKSAE KKKKEIVDSV PKELPGDKAS ASVVDTPEEE
401: EEKVKDSPET VSKETDLEKD ELKTGERDDK AEEEIQEPDV LIITSENGNV VSEDTKPSDR RASLPAKIDE SQQQDDGLTT HSGRKIPSYM APTASAKARV
501: RGGQGSPRIG GQEKPEKNGT TRRHSLPHIA NNDKLSAMSP RVHRLLIASA KGSINSDRSF SSSKDIGGDK STKVEWKR

Best Arabidopsis Sequence Match ( AT2G02790.3 )
(BLAST)

001: MGKTPSPGKW IKSLLGKKSS KSSLEKGGEK LRSAKKEELV VKVKDNNVSK LPTEPPVVSS QEVAATQTVV VPDVVIAEKQ LSGDIEGDES SNVNLESGND
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGDKS TKAEWKR

Arabidopsis Description

IQD29IQ-domain 29 [Source:UniProtKB/TrEMBL;Acc:F4IRA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.