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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67405 Canola cytosol 92.0 91.36
CDY04137 Canola cytosol, plastid 78.96 80.64
CDY04138 Canola cytosol, plastid 78.43 80.39
CDY45197 Canola nucleus, plastid 80.7 79.59
CDY17427 Canola cytosol, plastid 78.09 79.19
CDY03037 Canola cytosol 78.61 78.2
AT2G02790.1 Thale cress cytosol 77.91 70.44
CDY39317 Canola cytosol 52.0 49.26
CDY49085 Canola cytosol 51.3 48.12
Os05t0535900-01 Rice cytosol 34.61 34.67
Solyc05g007130.2.1 Tomato cytosol, plastid 33.22 34.66
PGSC0003DMT400045444 Potato cytosol, plastid 33.22 34.35
KRH74806 Soybean cytosol, plastid 33.04 33.75
Zm00001d038838_P001 Maize mitochondrion 33.57 33.62
KXG22418 Sorghum cytosol, plastid 33.57 33.33
KRH69321 Soybean cytosol, mitochondrion 32.35 33.04
Zm00001d011138_P003 Maize cytosol, plastid 33.74 32.83
GSMUA_Achr8P26180_001 Banana mitochondrion 29.91 32.76
CDX90650 Canola mitochondrion 5.74 32.04
KRH45861 Soybean plastid 30.43 31.99
KXG33252 Sorghum cytosol 30.96 31.84
GSMUA_AchrUn_... Banana mitochondrion 28.0 31.82
TraesCS1A01G357500.3 Wheat cytosol, mitochondrion, plastid 32.0 31.78
KRG99144 Soybean cytosol, plastid 30.09 31.63
TraesCS1B01G374100.2 Wheat cytosol, mitochondrion 31.83 31.61
TraesCS1D01G361800.3 Wheat cytosol, mitochondrion, plastid 31.48 31.26
HORVU1Hr1G080360.4 Barley mitochondrion 32.0 31.24
CDY26720 Canola cytosol, mitochondrion 30.61 31.21
CDX83805 Canola cytosol, mitochondrion 30.26 31.18
CDY29016 Canola mitochondrion 5.57 31.07
CDY19251 Canola cytosol, mitochondrion 29.91 30.71
TraesCS3B01G276000.1 Wheat cytosol, plastid 29.22 30.66
TraesCS3A01G244100.1 Wheat cytosol, plastid 29.22 30.66
Os01t0716200-01 Rice nucleus 30.26 30.31
TraesCS3D01G247300.1 Wheat cytosol, plastid 28.87 30.29
Zm00001d043655_P002 Maize mitochondrion 30.26 30.26
HORVU3Hr1G067750.8 Barley cytosol, plastid 28.52 29.5
CDY29768 Canola cytosol 7.65 26.35
CDX73724 Canola mitochondrion 5.91 26.15
CDX96693 Canola nucleus 30.61 26.15
CDY50677 Canola nucleus 15.3 23.91
CDX78003 Canola mitochondrion 6.26 23.68
CDY36861 Canola nucleus 15.13 23.26
CDY53440 Canola mitochondrion 11.3 22.41
CDY46537 Canola cytosol, mitochondrion 11.3 22.41
CDX98994 Canola mitochondrion 13.22 21.47
CDX70019 Canola cytosol, mitochondrion 13.04 21.19
CDY64325 Canola cytosol 13.57 20.91
CDX78285 Canola plastid 11.83 19.77
CDY45643 Canola cytosol 11.13 19.63
CDX85648 Canola nucleus 13.04 18.99
CDX70505 Canola nucleus 14.26 18.39
CDX78523 Canola nucleus 14.09 18.16
CDX91120 Canola nucleus 11.83 18.13
CDY00253 Canola plastid 12.35 18.02
CDX86928 Canola mitochondrion, plastid 12.35 18.02
CDX81042 Canola plastid 12.0 17.83
CDY43103 Canola cytosol 11.13 17.39
CDY00251 Canola plastid 12.35 17.27
CDX98787 Canola mitochondrion 8.87 17.23
CDX75883 Canola cytosol 11.13 17.07
CDY68636 Canola cytosol 11.48 16.97
CDX82400 Canola cytosol 10.78 16.62
CDY72577 Canola cytosol, mitochondrion 8.35 16.55
CDY67178 Canola cytosol, mitochondrion 11.13 16.49
CDX92076 Canola cytosol 10.96 16.28
CDY53133 Canola nucleus 13.57 16.05
CDY47784 Canola mitochondrion 10.78 15.98
CDY30233 Canola mitochondrion 10.78 15.98
CDY41417 Canola mitochondrion 8.17 15.72
CDY41252 Canola cytosol, mitochondrion 13.22 15.57
CDY41368 Canola mitochondrion, plastid 11.3 15.48
CDX76341 Canola mitochondrion, plastid 11.13 15.24
CDX94150 Canola nucleus 12.17 15.09
CDX83739 Canola nucleus 19.3 15.02
CDX98786 Canola nucleus 12.35 14.95
CDY62588 Canola nucleus 19.13 14.84
CDY44186 Canola nucleus, plastid 18.61 14.64
CDX70272 Canola cytosol, mitochondrion 7.13 13.99
CDY29389 Canola nucleus, plastid 18.09 13.9
CDY41423 Canola cytosol, mitochondrion 6.96 13.65
CDY14162 Canola endoplasmic reticulum 7.48 12.84
CDY04907 Canola endoplasmic reticulum 7.48 12.84
CDX75112 Canola cytosol 1.91 7.91
Protein Annotations
EnsemblPlants:CDY41676EnsemblPlantsGene:GSBRNA2T00073356001Gene3D:1.20.5.190GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:DUF4005InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSncoils:CoilPANTHER:PTHR32295PANTHER:PTHR32295:SF48
PFAM:PF00612PFAM:PF13178PFscan:PS50096ProteinID:CDY41676ProteinID:CDY41676.1SEG:seg
SMART:SM00015UniParc:UPI0004EEF6AAUniProt:A0A078HVD8MapMan:35.1::
Description
BnaC02g34780DBnaC02g34780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVD8]
Coordinates
chrLK032503:-:70484..73399
Molecular Weight (calculated)
62911.7 Da
IEP (calculated)
10.449
GRAVY (calculated)
-0.842
Length
575 amino acids
Sequence
(BLAST)
001: MGKTPSPGKW IKSLLGKKSS KSSLEKGTVK LRSANKEEIV VKVKDTNVSD LPTNLPVLVS SQEVAAATQA VIVPDAVVPE KQPSEELNVN LESGNDTEEL
101: KLEEAATKVQ AAVRSHQARE ELQKLKGIIK LQAVIRGHLV RRQAVATYSC IWGIVKLQAL LRGKKARSSE TGTQLQKTIS EPENPETLQG STYRWLENPT
201: KLSMIDKLLV SSPKALPLKI QYGPEDPNSA MVWLERWTLL QVWAPGPLVV KSLVAKSQTK KRSFQPVEAD KGKLKKGIKK PPGGLTTGSS SSSRSTAEKE
301: KPKRNVRKAS TLGKEVSRTE NDKSKQNSRK STSAVKEVSS SLEFKEEMPR VSLRKSSVSN GIEKPIRRSA EKKKEIADSV QKESPGDEVS AHVVDTPEEE
401: KVKDSTETVS KDESSPALDA MEQDELKTEE RNDKAEEEIQ EPDLQISSEN GNDTKPSDRR ASLPAKIENH RQEEGLTHSG RKIPSYMAPT ASAKARVRGG
501: QGSPRFGGQE KPGKNGITRR HSLPPAAANG KLNTMSPRAH RLLIASAKGS MNSDRSFSSS KDIGGDKSTK AEWKR
Best Arabidopsis Sequence Match ( AT1G14380.6 )
(BLAST)
001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEEGDNI ESSGKEKDTG
401: DSVQIESEGK VLEGGDNIEF GEKEKDKADA VPIEFDIVKD EKSPVLDRTE EDELKTAETS DKAEALKCAD VKVSSENGNV GSDNTKQSEK RALLPANIDK
501: QDDGLTLSGR KIPSYMAPTA SAKARVKGEA SPRFAQAKTE INGALRRHSL PSPANGKLST TTMSPRAQKL LLASAKGSMN GDKSFTSSKD ITHKSTRTDW
601: KR
Arabidopsis Description
IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.