Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY67405 | Canola | cytosol | 92.0 | 91.36 |
CDY04137 | Canola | cytosol, plastid | 78.96 | 80.64 |
CDY04138 | Canola | cytosol, plastid | 78.43 | 80.39 |
CDY45197 | Canola | nucleus, plastid | 80.7 | 79.59 |
CDY17427 | Canola | cytosol, plastid | 78.09 | 79.19 |
CDY03037 | Canola | cytosol | 78.61 | 78.2 |
AT2G02790.1 | Thale cress | cytosol | 77.91 | 70.44 |
CDY39317 | Canola | cytosol | 52.0 | 49.26 |
CDY49085 | Canola | cytosol | 51.3 | 48.12 |
Os05t0535900-01 | Rice | cytosol | 34.61 | 34.67 |
Solyc05g007130.2.1 | Tomato | cytosol, plastid | 33.22 | 34.66 |
PGSC0003DMT400045444 | Potato | cytosol, plastid | 33.22 | 34.35 |
KRH74806 | Soybean | cytosol, plastid | 33.04 | 33.75 |
Zm00001d038838_P001 | Maize | mitochondrion | 33.57 | 33.62 |
KXG22418 | Sorghum | cytosol, plastid | 33.57 | 33.33 |
KRH69321 | Soybean | cytosol, mitochondrion | 32.35 | 33.04 |
Zm00001d011138_P003 | Maize | cytosol, plastid | 33.74 | 32.83 |
GSMUA_Achr8P26180_001 | Banana | mitochondrion | 29.91 | 32.76 |
CDX90650 | Canola | mitochondrion | 5.74 | 32.04 |
KRH45861 | Soybean | plastid | 30.43 | 31.99 |
KXG33252 | Sorghum | cytosol | 30.96 | 31.84 |
GSMUA_AchrUn_... | Banana | mitochondrion | 28.0 | 31.82 |
TraesCS1A01G357500.3 | Wheat | cytosol, mitochondrion, plastid | 32.0 | 31.78 |
KRG99144 | Soybean | cytosol, plastid | 30.09 | 31.63 |
TraesCS1B01G374100.2 | Wheat | cytosol, mitochondrion | 31.83 | 31.61 |
TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 31.48 | 31.26 |
HORVU1Hr1G080360.4 | Barley | mitochondrion | 32.0 | 31.24 |
CDY26720 | Canola | cytosol, mitochondrion | 30.61 | 31.21 |
CDX83805 | Canola | cytosol, mitochondrion | 30.26 | 31.18 |
CDY29016 | Canola | mitochondrion | 5.57 | 31.07 |
CDY19251 | Canola | cytosol, mitochondrion | 29.91 | 30.71 |
TraesCS3B01G276000.1 | Wheat | cytosol, plastid | 29.22 | 30.66 |
TraesCS3A01G244100.1 | Wheat | cytosol, plastid | 29.22 | 30.66 |
Os01t0716200-01 | Rice | nucleus | 30.26 | 30.31 |
TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 28.87 | 30.29 |
Zm00001d043655_P002 | Maize | mitochondrion | 30.26 | 30.26 |
HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 28.52 | 29.5 |
CDY29768 | Canola | cytosol | 7.65 | 26.35 |
CDX73724 | Canola | mitochondrion | 5.91 | 26.15 |
CDX96693 | Canola | nucleus | 30.61 | 26.15 |
CDY50677 | Canola | nucleus | 15.3 | 23.91 |
CDX78003 | Canola | mitochondrion | 6.26 | 23.68 |
CDY36861 | Canola | nucleus | 15.13 | 23.26 |
CDY53440 | Canola | mitochondrion | 11.3 | 22.41 |
CDY46537 | Canola | cytosol, mitochondrion | 11.3 | 22.41 |
CDX98994 | Canola | mitochondrion | 13.22 | 21.47 |
CDX70019 | Canola | cytosol, mitochondrion | 13.04 | 21.19 |
CDY64325 | Canola | cytosol | 13.57 | 20.91 |
CDX78285 | Canola | plastid | 11.83 | 19.77 |
CDY45643 | Canola | cytosol | 11.13 | 19.63 |
CDX85648 | Canola | nucleus | 13.04 | 18.99 |
CDX70505 | Canola | nucleus | 14.26 | 18.39 |
CDX78523 | Canola | nucleus | 14.09 | 18.16 |
CDX91120 | Canola | nucleus | 11.83 | 18.13 |
CDY00253 | Canola | plastid | 12.35 | 18.02 |
CDX86928 | Canola | mitochondrion, plastid | 12.35 | 18.02 |
CDX81042 | Canola | plastid | 12.0 | 17.83 |
CDY43103 | Canola | cytosol | 11.13 | 17.39 |
CDY00251 | Canola | plastid | 12.35 | 17.27 |
CDX98787 | Canola | mitochondrion | 8.87 | 17.23 |
CDX75883 | Canola | cytosol | 11.13 | 17.07 |
CDY68636 | Canola | cytosol | 11.48 | 16.97 |
CDX82400 | Canola | cytosol | 10.78 | 16.62 |
CDY72577 | Canola | cytosol, mitochondrion | 8.35 | 16.55 |
CDY67178 | Canola | cytosol, mitochondrion | 11.13 | 16.49 |
CDX92076 | Canola | cytosol | 10.96 | 16.28 |
CDY53133 | Canola | nucleus | 13.57 | 16.05 |
CDY47784 | Canola | mitochondrion | 10.78 | 15.98 |
CDY30233 | Canola | mitochondrion | 10.78 | 15.98 |
CDY41417 | Canola | mitochondrion | 8.17 | 15.72 |
CDY41252 | Canola | cytosol, mitochondrion | 13.22 | 15.57 |
CDY41368 | Canola | mitochondrion, plastid | 11.3 | 15.48 |
CDX76341 | Canola | mitochondrion, plastid | 11.13 | 15.24 |
CDX94150 | Canola | nucleus | 12.17 | 15.09 |
CDX83739 | Canola | nucleus | 19.3 | 15.02 |
CDX98786 | Canola | nucleus | 12.35 | 14.95 |
CDY62588 | Canola | nucleus | 19.13 | 14.84 |
CDY44186 | Canola | nucleus, plastid | 18.61 | 14.64 |
CDX70272 | Canola | cytosol, mitochondrion | 7.13 | 13.99 |
CDY29389 | Canola | nucleus, plastid | 18.09 | 13.9 |
CDY41423 | Canola | cytosol, mitochondrion | 6.96 | 13.65 |
CDY14162 | Canola | endoplasmic reticulum | 7.48 | 12.84 |
CDY04907 | Canola | endoplasmic reticulum | 7.48 | 12.84 |
CDX75112 | Canola | cytosol | 1.91 | 7.91 |
Protein Annotations
EnsemblPlants:CDY41676 | EnsemblPlantsGene:GSBRNA2T00073356001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF48 |
PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY41676 | ProteinID:CDY41676.1 | SEG:seg |
SMART:SM00015 | UniParc:UPI0004EEF6AA | UniProt:A0A078HVD8 | MapMan:35.1 | : | : |
Description
BnaC02g34780DBnaC02g34780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVD8]
Coordinates
chrLK032503:-:70484..73399
Molecular Weight (calculated)
62911.7 Da
IEP (calculated)
10.449
GRAVY (calculated)
-0.842
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTPSPGKW IKSLLGKKSS KSSLEKGTVK LRSANKEEIV VKVKDTNVSD LPTNLPVLVS SQEVAAATQA VIVPDAVVPE KQPSEELNVN LESGNDTEEL
101: KLEEAATKVQ AAVRSHQARE ELQKLKGIIK LQAVIRGHLV RRQAVATYSC IWGIVKLQAL LRGKKARSSE TGTQLQKTIS EPENPETLQG STYRWLENPT
201: KLSMIDKLLV SSPKALPLKI QYGPEDPNSA MVWLERWTLL QVWAPGPLVV KSLVAKSQTK KRSFQPVEAD KGKLKKGIKK PPGGLTTGSS SSSRSTAEKE
301: KPKRNVRKAS TLGKEVSRTE NDKSKQNSRK STSAVKEVSS SLEFKEEMPR VSLRKSSVSN GIEKPIRRSA EKKKEIADSV QKESPGDEVS AHVVDTPEEE
401: KVKDSTETVS KDESSPALDA MEQDELKTEE RNDKAEEEIQ EPDLQISSEN GNDTKPSDRR ASLPAKIENH RQEEGLTHSG RKIPSYMAPT ASAKARVRGG
501: QGSPRFGGQE KPGKNGITRR HSLPPAAANG KLNTMSPRAH RLLIASAKGS MNSDRSFSSS KDIGGDKSTK AEWKR
101: KLEEAATKVQ AAVRSHQARE ELQKLKGIIK LQAVIRGHLV RRQAVATYSC IWGIVKLQAL LRGKKARSSE TGTQLQKTIS EPENPETLQG STYRWLENPT
201: KLSMIDKLLV SSPKALPLKI QYGPEDPNSA MVWLERWTLL QVWAPGPLVV KSLVAKSQTK KRSFQPVEAD KGKLKKGIKK PPGGLTTGSS SSSRSTAEKE
301: KPKRNVRKAS TLGKEVSRTE NDKSKQNSRK STSAVKEVSS SLEFKEEMPR VSLRKSSVSN GIEKPIRRSA EKKKEIADSV QKESPGDEVS AHVVDTPEEE
401: KVKDSTETVS KDESSPALDA MEQDELKTEE RNDKAEEEIQ EPDLQISSEN GNDTKPSDRR ASLPAKIENH RQEEGLTHSG RKIPSYMAPT ASAKARVRGG
501: QGSPRFGGQE KPGKNGITRR HSLPPAAANG KLNTMSPRAH RLLIASAKGS MNSDRSFSSS KDIGGDKSTK AEWKR
001: MGKTPGKWIK TLLLGKKSPK SNSDNRSQKL KSAKKEELVE SVTEDLSNLT VDPPVVSSQP VPASTAQNVV SPINGDESKD NLESRNDLGE VELEQAAIKV
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEEGDNI ESSGKEKDTG
401: DSVQIESEGK VLEGGDNIEF GEKEKDKADA VPIEFDIVKD EKSPVLDRTE EDELKTAETS DKAEALKCAD VKVSSENGNV GSDNTKQSEK RALLPANIDK
501: QDDGLTLSGR KIPSYMAPTA SAKARVKGEA SPRFAQAKTE INGALRRHSL PSPANGKLST TTMSPRAQKL LLASAKGSMN GDKSFTSSKD ITHKSTRTDW
601: KR
101: QATFRAHQAR RAFRTLKGII RLQAVIRGHL VRRQAIATYS CIWGIVKFQA LVRGQKARSS DIAIQFQKKH MEASDSEVLQ SSTCSWMDNP TKFVFVDKLL
201: ASSPTALPLK IQYGPEEPNS AKVWLERWTQ LQVWSSGSRV PRIEIPKSQS KKRNYQAVVE AEKKRPKRSI KKPSGTTSGT GPSRFTAERN KPKRNVRKAS
301: TLSKDPLRNE SDKANHNSRK SRSGSKEGSP LEIKDEKPSP SLKRSSLSNG SKKATLRSAE KKKKDIPDSS VQIQPEGKVS ENVLEEGDNI ESSGKEKDTG
401: DSVQIESEGK VLEGGDNIEF GEKEKDKADA VPIEFDIVKD EKSPVLDRTE EDELKTAETS DKAEALKCAD VKVSSENGNV GSDNTKQSEK RALLPANIDK
501: QDDGLTLSGR KIPSYMAPTA SAKARVKGEA SPRFAQAKTE INGALRRHSL PSPANGKLST TTMSPRAQKL LLASAKGSMN GDKSFTSSKD ITHKSTRTDW
601: KR
Arabidopsis Description
IQD28At1g14380 [Source:UniProtKB/TrEMBL;Acc:Q8GZ87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.