CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028807.1-P	Field mustard	mitochondrion	97.24	74.21
CDY14162	Canola	endoplasmic reticulum	81.03	70.15
CDY04907	Canola	endoplasmic reticulum	81.03	70.15
CDY41417	Canola	mitochondrion	72.07	69.9
CDX70272	Canola	cytosol, mitochondrion	68.62	67.92
CDY41423	Canola	cytosol, mitochondrion	68.28	67.58
KRH33197	Soybean	cytosol, mitochondrion	46.9	34.87
CDX90650	Canola	mitochondrion	11.72	33.01
CDY29016	Canola	mitochondrion	11.38	32.04
VIT_08s0007g05960.t01	Wine grape	cytosol	45.86	31.29
PGSC0003DMT400033127	Potato	cytosol, mitochondrion	42.41	30.37
Solyc04g016480.2.1	Tomato	mitochondrion, nucleus	41.72	29.51
CDY29768	Canola	cytosol	16.21	28.14
VIT_08s0007g05980.t01	Wine grape	cytosol	42.76	27.43
Solyc10g079240.1.1	Tomato	mitochondrion, nucleus	38.62	26.6
CDX73724	Canola	mitochondrion	11.72	26.15
CDX78003	Canola	mitochondrion	12.07	23.03
CDX91120	Canola	nucleus	28.28	21.87
CDY46537	Canola	cytosol, mitochondrion	21.72	21.72
CDX85648	Canola	nucleus	29.31	21.52
GSMUA_Achr3P17450_001	Banana	nucleus	33.1	21.38
CDY53440	Canola	mitochondrion	21.03	21.03
CDX78285	Canola	plastid	24.48	20.64
CDX70019	Canola	cytosol, mitochondrion	25.17	20.62
CDX98994	Canola	mitochondrion	25.17	20.62
CDY00253	Canola	plastid	26.55	19.54
CDY45643	Canola	cytosol	21.72	19.33
CDX86928	Canola	mitochondrion, plastid	26.21	19.29
CDX78523	Canola	nucleus	29.66	19.28
TraesCS5A01G163000.1	Wheat	nucleus	31.38	19.12
CDX70505	Canola	nucleus	29.31	19.06
TraesCS5B01G160400.1	Wheat	cytosol	31.03	18.91
TraesCS5D01G168000.2	Wheat	nucleus	31.03	18.75
CDY43103	Canola	cytosol	23.79	18.75
CDY00251	Canola	plastid	26.55	18.73
CDX81042	Canola	plastid	24.83	18.6
Os03t0355700-00	Rice	cytosol	28.62	18.4
Zm00001d029197_P001	Maize	nucleus	30.0	18.28
EER94844	Sorghum	cytosol	31.38	18.24
CDY47784	Canola	mitochondrion	24.14	18.04
CDX82400	Canola	cytosol	23.1	17.96
CDX75883	Canola	cytosol	23.1	17.87
CDX92076	Canola	cytosol	23.79	17.83
CDY30233	Canola	mitochondrion	23.79	17.78
CDY68636	Canola	cytosol	23.79	17.74
CDY67178	Canola	cytosol, mitochondrion	22.76	17.01
CDY41368	Canola	mitochondrion, plastid	23.79	16.43
CDY41252	Canola	cytosol, mitochondrion	27.24	16.19
CDX94150	Canola	nucleus	25.86	16.16
CDY53133	Canola	nucleus	26.9	16.05
CDX76341	Canola	mitochondrion, plastid	23.1	15.95
HORVU5Hr1G050840.5	Barley	cytosol, plastid	29.66	15.47
CDX98786	Canola	nucleus	24.48	14.95
CDY50677	Canola	nucleus	18.97	14.95
CDY36861	Canola	nucleus	18.97	14.71
PGSC0003DMT400021096	Potato	nucleus	10.69	14.03
CDY64325	Canola	cytosol	17.93	13.94
CDX98787	Canola	mitochondrion	10.69	10.47
CDY19251	Canola	cytosol, mitochondrion	17.59	9.11
CDY49085	Canola	cytosol	18.97	8.97
CDY26720	Canola	cytosol, mitochondrion	17.24	8.87
CDY39317	Canola	cytosol	18.28	8.73
CDX83805	Canola	cytosol, mitochondrion	16.55	8.6
CDY41676	Canola	cytosol, plastid	16.55	8.35
CDY67405	Canola	cytosol	15.86	7.94
CDY03037	Canola	cytosol	15.52	7.79
CDY04138	Canola	cytosol, plastid	14.48	7.49
CDY04137	Canola	cytosol, plastid	14.48	7.46
CDY45197	Canola	nucleus, plastid	14.83	7.38
CDX96693	Canola	nucleus	16.55	7.13
CDY17427	Canola	cytosol, plastid	13.79	7.05
CDY44186	Canola	nucleus, plastid	16.55	6.57
CDX83739	Canola	nucleus	15.52	6.09
CDY29389	Canola	nucleus, plastid	15.52	6.02
CDY62588	Canola	nucleus	14.83	5.8
CDX75112	Canola	cytosol	1.03	2.16

Protein Annotations

EnsemblPlants:CDY72577	EnsemblPlantsGene:GSBRNA2T00033675001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF41	PFAM:PF00612	PFscan:PS50096
ProteinID:CDY72577	ProteinID:CDY72577.1	SEG:seg	SMART:SM00015	UniParc:UPI0004EF24AE	UniProt:A0A078K3U1
MapMan:35.2	:	:	:	:	:

Description

BnaAnng41540DBnaAnng41540D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K3U1]

Coordinates

chrLK051978:+:742..2049

Molecular Weight (calculated)

33221.7 Da

IEP (calculated)

11.822

GRAVY (calculated)

-0.582

Length

290 amino acids

Sequence
(BLAST)

001: MAKRSSWFGW IKRLFTCEAK AKAEKKSRRL RWVFRRLKLR HQISTRVQET RTLNQATEDQ RKHAMNVAIV TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKRDTNLA AIKIQSAFRA YLARKALRAL KALVKLQAIV RGRAVRRSVS TLLKTKPSNK ASASSLITRT TEGKHWSKIK ELKVKCNGQN VWDSSALTKE
201: DIKAIWLRKQ EGVVMRERML KYSRSHRERR SPHMLLESLH TKDMRMRSCR LEHWGEPKSL IPSEILVPTK VKLRTLQRQD SNDGQESPFS

Best Arabidopsis Sequence Match ( AT5G03960.3 )
(BLAST)

001: MAKRRSWFGW MKRLFICEAK ARAEKKPRRL RWVFKRLKLR PQLATCGQET RTLNEATQDQ RKHAMNVAIA TAAAAEAAVA AAKAAAEVVR MAGNAFTSQH
101: FVKKLAPNVA AIKIQSAFRA SLARKALRAL KALVRLQAIV RGRAVRRKVS ALLKSSHSNK ASTSNIIQRQ TERKHWSNTK SEIKEELQVS NHSLCNSKVK
201: CNGWDSSALT KEDIKAIWLR KQEGVIKRDR MLKYSRSQRE RRSPHMLVES LYAKDMGMRS CRLEHWGESK SAKSINSFLI PSEMLVPTKV KLRSLQRQDS
301: GDGQDSPFSF PRRSFSRLEQ SILEDESWFQ RSNGFQPYMS VTESAREKMR SLSTPRQRVG IMDSLFDNYK KDGDKVSLWS TFVCENSKIN NAKKSSLTTY
401: QHNC

Arabidopsis Description

IQD12IQ-domain 12 [Source:TAIR;Acc:AT5G03960]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.