CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30233	Canola	mitochondrion	95.36	95.36
AT4G29150.1	Thale cress	mitochondrion	84.02	81.7
VIT_11s0016g03030.t01	Wine grape	cytosol	50.52	45.06
KRH60203	Soybean	cytosol, mitochondrion	40.72	43.89
KRH74242	Soybean	cytosol, mitochondrion	46.13	42.62
KRH41488	Soybean	cytosol, mitochondrion	46.13	41.05
Solyc12g008520.1.1	Tomato	cytosol	42.78	40.59
CDX75883	Canola	cytosol	39.18	40.53
KRH48992	Soybean	endoplasmic reticulum	35.05	40.24
CDY43103	Canola	cytosol	37.89	39.95
CDY46537	Canola	cytosol, mitochondrion	29.38	39.31
CDX92076	Canola	cytosol	39.18	39.28
CDY68636	Canola	cytosol	39.18	39.07
CDY53440	Canola	mitochondrion	29.12	38.97
CDX82400	Canola	cytosol	37.11	38.61
CDY67178	Canola	cytosol, mitochondrion	38.14	38.14
CDX90650	Canola	mitochondrion	10.05	37.86
CDY29016	Canola	mitochondrion	9.79	36.89
CDY45643	Canola	cytosol	30.41	36.2
Os05t0187500-01	Rice	cytosol	43.81	36.17
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	34.28	36.04
PGSC0003DMT400000953	Potato	cytosol	33.51	35.71
TraesCS1D01G123800.1	Wheat	cytosol	41.75	35.68
TraesCS1B01G142100.1	Wheat	cytosol	41.75	35.68
TraesCS1A01G122900.1	Wheat	cytosol, plastid	41.75	35.68
GSMUA_Achr10P...	Banana	cytosol	40.46	35.6
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	34.28	35.47
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	36.86	35.4
Os01t0190500-01	Rice	cytosol, mitochondrion	42.01	35.05
GSMUA_AchrUn_...	Banana	cytosol	33.76	34.56
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	40.98	34.49
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	36.08	34.48
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	41.49	34.48
TraesCS3B01G127100.1	Wheat	cytosol	40.98	34.34
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	32.99	33.95
EES02320	Sorghum	mitochondrion	40.98	33.12
Zm00001d010366_P001	Maize	cytosol, mitochondrion	39.69	32.84
Zm00001d037688_P001	Maize	mitochondrion	38.92	32.68
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	33.51	32.5
KXG21487	Sorghum	cytosol, mitochondrion	40.98	32.25
Zm00001d039510_P001	Maize	cytosol, mitochondrion	39.95	32.22
Zm00001d008819_P001	Maize	mitochondrion	38.14	31.76
HORVU1Hr1G028250.6	Barley	mitochondrion	42.01	30.93
CDX78285	Canola	plastid	26.55	29.94
CDX70019	Canola	cytosol, mitochondrion	27.06	29.66
CDX98994	Canola	mitochondrion	27.06	29.66
CDY29768	Canola	cytosol	12.37	28.74
CDX73724	Canola	mitochondrion	9.54	28.46
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	40.98	27.75
CDX81042	Canola	plastid	26.55	26.61
CDY00253	Canola	plastid	26.8	26.4
CDX86928	Canola	mitochondrion, plastid	26.55	26.14
CDY50677	Canola	nucleus	24.23	25.54
CDY36861	Canola	nucleus	24.48	25.4
CDY41423	Canola	cytosol, mitochondrion	19.07	25.26
CDY00251	Canola	plastid	26.55	25.06
CDX78003	Canola	mitochondrion	9.79	25.0
CDX70272	Canola	cytosol, mitochondrion	18.81	24.91
CDY72577	Canola	cytosol, mitochondrion	18.04	24.14
CDX94150	Canola	nucleus	28.35	23.71
CDY53133	Canola	nucleus	29.38	23.46
CDY41252	Canola	cytosol, mitochondrion	29.38	23.36
CDY41368	Canola	mitochondrion, plastid	25.26	23.33
CDX98786	Canola	nucleus	27.84	22.74
CDY04907	Canola	endoplasmic reticulum	19.33	22.39
CDY14162	Canola	endoplasmic reticulum	19.33	22.39
CDX76341	Canola	mitochondrion, plastid	24.23	22.38
CDX98787	Canola	mitochondrion	16.75	21.96
CDY64325	Canola	cytosol	20.88	21.72
CDY41417	Canola	mitochondrion	15.21	19.73
CDX85648	Canola	nucleus	18.04	17.72
CDX91120	Canola	nucleus	16.24	16.8
CDX78523	Canola	nucleus	17.78	15.47
CDX70505	Canola	nucleus	17.53	15.25
CDY19251	Canola	cytosol, mitochondrion	17.27	11.96
CDX83805	Canola	cytosol, mitochondrion	16.75	11.65
CDY26720	Canola	cytosol, mitochondrion	16.49	11.35
CDY41676	Canola	cytosol, plastid	15.98	10.78
CDY67405	Canola	cytosol	15.98	10.71
CDY03037	Canola	cytosol	15.72	10.55
CDY04137	Canola	cytosol, plastid	14.95	10.3
CDY04138	Canola	cytosol, plastid	14.69	10.16
CDY45197	Canola	nucleus, plastid	15.21	10.12
CDY17427	Canola	cytosol, plastid	14.43	9.88
CDX96693	Canola	nucleus	17.01	9.81
CDX83739	Canola	nucleus	18.04	9.47
CDX75112	Canola	cytosol	3.35	9.35
CDY44186	Canola	nucleus, plastid	17.53	9.3
CDY62588	Canola	nucleus	17.53	9.18
CDY49085	Canola	cytosol	14.43	9.14
CDY29389	Canola	nucleus, plastid	17.01	8.82
CDY39317	Canola	cytosol	13.66	8.73

Protein Annotations

EnsemblPlants:CDY47784	EnsemblPlantsGene:GSBRNA2T00088085001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF22	PFAM:PF00612
PFscan:PS50096	ProteinID:CDY47784	ProteinID:CDY47784.1	SEG:seg	SMART:SM00015	SUPFAM:SSF52540
UniParc:UPI0004EE7446	UniProt:A0A078IEJ3	MapMan:35.2	:	:	:

Description

BnaC07g41760DBnaC07g41760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEJ3]

Coordinates

chrLK032734:-:99557..101275

Molecular Weight (calculated)

41704.7 Da

IEP (calculated)

11.224

GRAVY (calculated)

-0.389

Length

388 amino acids

Sequence
(BLAST)

001: MGRATRWFMG LFGIKPSSCS GSGTISNRID RSSLAGVSLC DSYETIPPNI SEREAAWLRS FYKAGEEEIE RRAHAVAVAA ATAAAADAAV AAAKAAAAVV
101: RLRGQGKSGP LGVGNSRENR AAMQIQCTFR GYLARKALRA LKGVVKIQAL VRGFLVRKQA AATLRSMEAL VRAQATVKFQ RALRRMGNTA PARKSTERFS
201: GSLDNRNNGE ETAKIVEVDT GIRPGHYRIR VPVLSGSDFL DNPFRRTLSS PLSGRVPPRL LMPKPEWEDC SSKFPTAQST PRYAGGSPAR NICCYGGGVE
301: AEAEAEVDAH QLCFLSGEFH SNFTADTTSF RGGMRSHSAP RQRPGINAAG SGWRRSVGGN GGVRGQRPSC SGVREAVVGN IERRKAHW

Best Arabidopsis Sequence Match ( AT4G29150.1 )
(BLAST)

001: MRKNLTKLTR VKRETKMGRA TRWFKGLFGI KPSSCSGTDS GTISNRLDRS LCDSYETIPP NISEKEAAWL RSFYAAGEEE KERRTHAIAV AAATAAAADA
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW

Arabidopsis Description

IQD25IQ-domain 25 [Source:UniProtKB/TrEMBL;Acc:F4JMV6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.