Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G127100.1 | Wheat | cytosol | 77.49 | 95.9 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 76.61 | 95.23 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 76.79 | 94.22 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 58.99 | 72.69 |
| EES02320 | Sorghum | mitochondrion | 54.8 | 65.42 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 54.28 | 64.66 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 58.81 | 63.95 |
| Zm00001d008819_P001 | Maize | mitochondrion | 50.44 | 62.02 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 37.7 | 53.47 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 34.9 | 53.33 |
| GSMUA_Achr10P... | Banana | cytosol | 40.84 | 53.06 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 36.65 | 52.24 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 35.78 | 50.49 |
| KRH47199 | Soybean | cytosol | 34.38 | 49.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.81 | 49.6 |
| VIT_11s0016g03030.t01 | Wine grape | cytosol | 37.17 | 48.97 |
| KRH44268 | Soybean | cytosol | 34.21 | 48.76 |
| Solyc06g066430.2.1 | Tomato | nucleus | 33.33 | 48.72 |
| KRH74242 | Soybean | cytosol, mitochondrion | 35.6 | 48.57 |
| CDY43103 | Canola | cytosol | 31.06 | 48.37 |
| KRH60203 | Soybean | cytosol, mitochondrion | 30.19 | 48.06 |
| KRH48993 | Soybean | plastid | 7.85 | 47.87 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 30.89 | 46.95 |
| KRH41488 | Soybean | cytosol, mitochondrion | 35.6 | 46.79 |
| CDX75883 | Canola | cytosol | 30.54 | 46.67 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 32.46 | 46.5 |
| Solyc12g008520.1.1 | Tomato | cytosol | 33.16 | 46.45 |
| Bra001633.1-P | Field mustard | cytosol | 30.19 | 46.38 |
| CDX82400 | Canola | cytosol | 30.02 | 46.11 |
| CDY68636 | Canola | cytosol | 31.24 | 46.02 |
| CDX92076 | Canola | cytosol | 31.06 | 45.99 |
| Bra022163.1-P | Field mustard | cytosol | 31.06 | 45.99 |
| Bra021181.1-P | Field mustard | cytosol | 31.06 | 45.76 |
| KRH48992 | Soybean | endoplasmic reticulum | 26.88 | 45.56 |
| AT3G16490.1 | Thale cress | cytosol | 30.72 | 45.24 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 28.97 | 44.99 |
| CDY67178 | Canola | cytosol, mitochondrion | 30.02 | 44.33 |
| CDY46537 | Canola | cytosol, mitochondrion | 21.64 | 42.76 |
| Bra014304.1-P | Field mustard | cytosol, mitochondrion | 21.64 | 42.76 |
| CDY53440 | Canola | mitochondrion | 21.47 | 42.41 |
| PGSC0003DMT400000953 | Potato | cytosol | 26.7 | 42.03 |
| Bra024161.1-P | Field mustard | mitochondrion | 28.45 | 42.01 |
| CDY30233 | Canola | mitochondrion | 28.27 | 41.75 |
| AT4G29150.1 | Thale cress | mitochondrion | 28.62 | 41.1 |
| CDY47784 | Canola | mitochondrion | 27.75 | 40.98 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 24.26 | 39.6 |
| CDY45643 | Canola | cytosol | 22.16 | 38.96 |
| Bra030407.1-P | Field mustard | cytosol | 22.34 | 37.98 |
| PGSC0003DMT400042595 | Potato | nucleus | 9.95 | 37.5 |
| KRH23382 | Soybean | cytosol | 24.08 | 36.32 |
| KRH09951 | Soybean | cytosol | 23.91 | 36.24 |
| HORVU3Hr1G070750.1 | Barley | mitochondrion | 14.83 | 34.0 |
| HORVU3Hr1G070760.1 | Barley | mitochondrion | 19.9 | 30.08 |
| HORVU4Hr1G073480.2 | Barley | cytosol, mitochondrion | 23.73 | 29.89 |
| HORVU2Hr1G106550.2 | Barley | mitochondrion | 22.16 | 29.26 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 18.32 | 28.85 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 23.21 | 28.42 |
| HORVU4Hr1G056380.1 | Barley | cytosol, mitochondrion | 16.4 | 28.14 |
| HORVU6Hr1G003870.1 | Barley | cytosol, mitochondrion | 15.01 | 27.92 |
| HORVU1Hr1G075880.4 | Barley | cytosol | 15.71 | 26.09 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 21.82 | 22.48 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 16.06 | 21.15 |
| HORVU2Hr1G106540.1 | Barley | cytosol, nucleus | 9.77 | 18.54 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 16.23 | 15.79 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 14.31 | 14.75 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 9.6 | 14.14 |
| HORVU2Hr1G109850.3 | Barley | nucleus | 12.57 | 10.07 |
| HORVU2Hr1G124440.1 | Barley | cytosol | 0.35 | 3.28 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G019630.3 | EnsemblPlantsGene:HORVU3Hr1G019630 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF27 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI000B46DD4F | UniProt:A0A287KC89 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:56355607..56357981
Molecular Weight (calculated)
62492.9 Da
IEP (calculated)
11.039
GRAVY (calculated)
-0.388
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPFLFIWI PLPTPRLHSR FPLLFKPHAS FLLSVHYTLP LTSRLNLLER AAFSGRPELR VPAMGKAARW LRSLLGGGKK EQGKEQRRPA TAPHGDRKRW
101: SFCKSTRDSA EAEAAAAAAA AVSGNAAIAR AAEAAWLKSL YNETEREQSK HAIAVAAATA MAADAAVAAA QAAVEVVRLT SKGPTSTVLA GAVAEPRGRA
201: SAAVKIQTAF RGFLAKKALR ALKGLVKLQA LVRGYLVRKQ AAATLQSMQA LVRAQACIRA ARSRAAALPT NLRVHPTPIR PRYSLVSDHG RHRFRPKQPI
301: SMSLSVRGRV LLADRNKRAR ACVVSCLCLQ QERYSAEDSR SDHGVVPYYS RRLSASVESS SCYGYGYGYD RSPKIVEMDT GRPKSRSSSL RTTSPGASEE
401: CYANSVSSPL MPCRAPPRIA APTARHLPEY EWCEKARPAT AQSTPRYASY APVTPTKSVC GGYTYSNSPS TLNCPSYMSS TRSSVAKVRS QSAPKQRPEE
501: GAVRKRVPLS EVIVLQEARA SLGGGGTQRS CNRPAQEEAF SFKKAVVSRF DRSSEAAERE RERDRDLFLQ KGW
101: SFCKSTRDSA EAEAAAAAAA AVSGNAAIAR AAEAAWLKSL YNETEREQSK HAIAVAAATA MAADAAVAAA QAAVEVVRLT SKGPTSTVLA GAVAEPRGRA
201: SAAVKIQTAF RGFLAKKALR ALKGLVKLQA LVRGYLVRKQ AAATLQSMQA LVRAQACIRA ARSRAAALPT NLRVHPTPIR PRYSLVSDHG RHRFRPKQPI
301: SMSLSVRGRV LLADRNKRAR ACVVSCLCLQ QERYSAEDSR SDHGVVPYYS RRLSASVESS SCYGYGYGYD RSPKIVEMDT GRPKSRSSSL RTTSPGASEE
401: CYANSVSSPL MPCRAPPRIA APTARHLPEY EWCEKARPAT AQSTPRYASY APVTPTKSVC GGYTYSNSPS TLNCPSYMSS TRSSVAKVRS QSAPKQRPEE
501: GAVRKRVPLS EVIVLQEARA SLGGGGTQRS CNRPAQEEAF SFKKAVVSRF DRSSEAAERE RERDRDLFLQ KGW
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.