Factsheet for AT3G16490.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68636	Canola	cytosol	89.97	89.97
Bra021181.1-P	Field mustard	cytosol	89.72	89.72
CDY67178	Canola	cytosol, mitochondrion	88.17	88.4
CDY43103	Canola	cytosol	83.55	88.32
CDX92076	Canola	cytosol	86.89	87.34
Bra022163.1-P	Field mustard	cytosol	86.89	87.34
CDX75883	Canola	cytosol	82.52	85.6
Bra001633.1-P	Field mustard	cytosol	80.46	83.91
CDX82400	Canola	cytosol	80.21	83.65
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	57.58	55.72
KRH47199	Soybean	cytosol	55.27	54.29
Solyc06g066430.2.1	Tomato	nucleus	54.5	54.08
AT1G51960.1	Thale cress	cytosol, mitochondrion	47.81	52.99
KRH44268	Soybean	cytosol	54.24	52.49
PGSC0003DMT400042595	Potato	nucleus	18.51	47.37
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	39.85	41.33
TraesCS1B01G142100.1	Wheat	cytosol	47.3	40.53
TraesCS1D01G123800.1	Wheat	cytosol	47.3	40.53
TraesCS1A01G122900.1	Wheat	cytosol, plastid	47.04	40.31
GSMUA_Achr10P...	Banana	cytosol	45.5	40.14
AT4G29150.1	Thale cress	mitochondrion	40.87	39.85
AT3G51380.1	Thale cress	mitochondrion	10.54	39.81
Os05t0187500-01	Rice	cytosol	48.07	39.79
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	41.13	39.41
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	40.87	39.36
Zm00001d037688_P001	Maize	mitochondrion	46.53	39.18
Os01t0190500-01	Rice	cytosol, mitochondrion	46.79	39.14
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	46.02	38.83
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	37.53	38.73
TraesCS3B01G127100.1	Wheat	cytosol	46.02	38.66
GSMUA_AchrUn_...	Banana	cytosol	37.53	38.52
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	46.02	38.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	36.25	38.21
EES02320	Sorghum	mitochondrion	46.79	37.92
Zm00001d010366_P001	Maize	cytosol, mitochondrion	45.5	37.74
KXG21487	Sorghum	cytosol, mitochondrion	47.3	37.32
Zm00001d039510_P001	Maize	cytosol, mitochondrion	45.24	36.59
Zm00001d008819_P001	Maize	mitochondrion	43.44	36.27
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	37.28	36.25
HORVU1Hr1G028250.6	Barley	mitochondrion	47.3	34.91
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	45.24	30.72
AT5G62070.1	Thale cress	cytosol, plastid	29.82	28.78
AT4G23060.1	Thale cress	mitochondrion, nucleus	32.65	26.24
AT5G07240.2	Thale cress	plastid	29.31	25.5
AT5G03960.2	Thale cress	cytosol, mitochondrion	22.36	21.53
AT4G14750.3	Thale cress	cytosol	24.16	20.43
AT5G13460.1	Thale cress	nucleus	20.57	18.06
AT1G18840.1	Thale cress	cytosol	21.34	14.51
AT1G74690.1	Thale cress	cytosol	21.59	14.31
AT1G14380.1	Thale cress	cytosol	17.74	10.39
AT2G02790.1	Thale cress	cytosol	16.2	9.91
AT1G19870.1	Thale cress	nucleus	17.74	8.69

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EntrezGene:820897	ProteinID:AEE75826.1	ArrayExpress:AT3G16490	EnsemblPlantsGene:AT3G16490
RefSeq:AT3G16490	TAIR:AT3G16490	RefSeq:AT3G16490-TAIR-G	EnsemblPlants:AT3G16490.1	TAIR:AT3G16490.1	Unigene:At.38890
ProteinID:BAB01148.1	EMBL:BT015939	EMBL:BT020577	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	InterPro:IPR000048	Symbol:IQD26	InterPro:IQ_motif_EF-hand-BS	RefSeq:NP_188270.1
InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PO:PO:0000037	PO:PO:0000230	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10
UniProt:Q9LK76	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI00000A5929	SEG:seg	:

Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]

Coordinates

chr3:-:5603848..5605765

Molecular Weight (calculated)

43662.7 Da

IEP (calculated)

10.652

GRAVY (calculated)

-0.713

Length

389 amino acids

Sequence
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.