Factsheet for TraesCS3D01G109900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G127100.1	Wheat	cytosol	97.18	96.76
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	96.31	95.07
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	95.23	76.61
Os01t0190500-01	Rice	cytosol, mitochondrion	73.1	72.47
TraesCS1D01G123800.1	Wheat	cytosol	67.9	68.94
EES02320	Sorghum	mitochondrion	66.81	64.17
Zm00001d039510_P001	Maize	cytosol, mitochondrion	66.59	63.83
Zm00001d008819_P001	Maize	mitochondrion	61.61	60.94
GSMUA_Achr10P...	Banana	cytosol	50.98	53.29
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	46.42	53.23
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	46.42	52.97
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	42.73	52.53
KRH47199	Soybean	cytosol	43.82	51.01
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	44.25	50.25
KRH44268	Soybean	cytosol	43.6	50.0
VIT_11s0016g03030.t01	Wine grape	cytosol	46.85	49.66
GSMUA_AchrUn_...	Banana	cytosol	40.78	49.6
Solyc06g066430.2.1	Tomato	nucleus	42.08	49.49
CDY43103	Canola	cytosol	38.83	48.64
KRH60203	Soybean	cytosol, mitochondrion	37.96	48.61
KRH74242	Soybean	cytosol, mitochondrion	44.03	48.33
KRH48993	Soybean	plastid	9.76	47.87
KRH41488	Soybean	cytosol, mitochondrion	44.9	47.48
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	38.61	47.21
Bra001633.1-P	Field mustard	cytosol	38.18	47.19
Solyc12g008520.1.1	Tomato	cytosol	41.65	46.94
CDX75883	Canola	cytosol	38.18	46.93
CDX82400	Canola	cytosol	37.96	46.92
CDY68636	Canola	cytosol	39.48	46.79
Bra022163.1-P	Field mustard	cytosol	39.26	46.77
CDX92076	Canola	cytosol	39.26	46.77
Bra021181.1-P	Field mustard	cytosol	39.26	46.53
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	36.88	46.07
AT3G16490.1	Thale cress	cytosol	38.83	46.02
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	39.48	45.5
CDY67178	Canola	cytosol, mitochondrion	37.96	45.1
KRH48992	Soybean	endoplasmic reticulum	31.67	43.2
Bra014304.1-P	Field mustard	cytosol, mitochondrion	26.9	42.76
CDY46537	Canola	cytosol, mitochondrion	26.9	42.76
CDY53440	Canola	mitochondrion	26.68	42.41
PGSC0003DMT400000953	Potato	cytosol	33.41	42.31
Bra024161.1-P	Field mustard	mitochondrion	35.14	41.75
CDY30233	Canola	mitochondrion	34.92	41.49
CDY47784	Canola	mitochondrion	34.49	40.98
AT4G29150.1	Thale cress	mitochondrion	35.14	40.6
AT1G51960.1	Thale cress	cytosol, mitochondrion	30.15	39.6
CDY45643	Canola	cytosol	27.77	39.26
PGSC0003DMT400042595	Potato	nucleus	12.8	38.82
Bra030407.1-P	Field mustard	cytosol	27.98	38.28
KRH09951	Soybean	cytosol	29.93	36.51
KRH23382	Soybean	cytosol	29.93	36.32
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	33.19	33.12
TraesCS1D01G344200.1	Wheat	cytosol	24.73	32.95
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	28.63	30.21
TraesCS3D01G275900.1	Wheat	mitochondrion	24.08	29.21
TraesCS4D01G275700.3	Wheat	cytosol, mitochondrion	29.93	28.57
TraesCS5D01G387500.1	Wheat	cytosol	28.63	28.51
TraesCS5D01G168000.2	Wheat	nucleus	26.9	25.83
TraesCS7D01G341000.1	Wheat	cytosol	21.26	22.12
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	19.52	15.54
TraesCS3D01G247300.1	Wheat	cytosol, plastid	18.44	15.51
TraesCS4D01G327500.1	Wheat	mitochondrion	12.15	14.11
TraesCS2D01G492600.1	Wheat	nucleus	19.96	10.69

Protein Annotations

EnsemblPlants:TraesCS3D01G109900.1	EnsemblPlantsGene:TraesCS3D01G109900	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF27	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr3D:+:63779061..63780680

Molecular Weight (calculated)

49563.6 Da

IEP (calculated)

10.797

GRAVY (calculated)

-0.508

Length

461 amino acids

Sequence
(BLAST)

001: MGKAARWLRG LLGGGGKKEQ GKEHRRPATS TAPHGDRKRW SFCKSTRDSA EAEAAAAAAA LSGNAAIARA AEAAWLKSLY NETEREQSKH AIAVAAATAA
101: AADAAVAAAQ AAVEVVRLTS KGPTSTVLAV AVAEPRGRAS AAVKIQTAFR GFLAKKALRA LKGLVKLQAL VRGYLVRKQA AATLQSMQAL VRAQACIRAA
201: RSRAAALPTN LRVHPTPVRP RYSLQERYST TEDSRSDHSV APYYSRRLSA SVESSSCHGY DRSPKIVEMD TGRPKSRSSS LRTTSPGASE ECYAHSVSSP
301: LMPCRAPPRI AAPTARHFPE YEWCEKARPA TAQSTPRYAS YAPVTPTKSA CGGYTYSNSP STLNCPSYMS GTQSSVAKVR SQSAPKQRPE EGAVRKRVPL
401: SEVIILQEGR ASLSGGTQRS CNRPAQEEAF SFKKAVVSRF DRSSEAAERE RDRDLFLQKG W

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.