Factsheet for TraesCS3A01G108100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G127100.1	Wheat	cytosol	95.5	96.33
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	95.07	96.31
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	94.22	76.79
Os01t0190500-01	Rice	cytosol, mitochondrion	71.95	72.26
TraesCS1A01G122900.1	Wheat	cytosol, plastid	66.81	68.72
Zm00001d039510_P001	Maize	cytosol, mitochondrion	66.6	64.66
EES02320	Sorghum	mitochondrion	66.38	64.58
Zm00001d008819_P001	Maize	mitochondrion	61.24	61.37
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	45.82	53.23
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	45.82	52.97
GSMUA_Achr10P...	Banana	cytosol	49.89	52.83
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	42.18	52.53
KRH47199	Soybean	cytosol	43.04	50.76
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	43.68	50.25
KRH44268	Soybean	cytosol	42.83	49.75
GSMUA_AchrUn_...	Banana	cytosol	40.04	49.34
Solyc06g066430.2.1	Tomato	nucleus	41.33	49.23
VIT_11s0016g03030.t01	Wine grape	cytosol	45.82	49.2
CDY43103	Canola	cytosol	38.76	49.18
KRH60203	Soybean	cytosol, mitochondrion	37.26	48.33
KRH74242	Soybean	cytosol, mitochondrion	43.25	48.1
KRH41488	Soybean	cytosol, mitochondrion	44.11	47.25
CDX75883	Canola	cytosol	37.9	47.2
Bra001633.1-P	Field mustard	cytosol	37.69	47.19
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	37.9	46.95
CDX82400	Canola	cytosol	37.47	46.92
KRH48993	Soybean	plastid	9.42	46.81
CDY68636	Canola	cytosol	38.97	46.79
Bra022163.1-P	Field mustard	cytosol	38.76	46.77
CDX92076	Canola	cytosol	38.76	46.77
Bra021181.1-P	Field mustard	cytosol	38.76	46.53
Solyc12g008520.1.1	Tomato	cytosol	40.69	46.45
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	36.4	46.07
AT3G16490.1	Thale cress	cytosol	38.33	46.02
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	39.19	45.75
CDY67178	Canola	cytosol, mitochondrion	37.47	45.1
KRH48992	Soybean	endoplasmic reticulum	31.26	43.2
Bra024161.1-P	Field mustard	mitochondrion	35.33	42.53
CDY30233	Canola	mitochondrion	35.12	42.27
Bra014304.1-P	Field mustard	cytosol, mitochondrion	26.12	42.07
CDY46537	Canola	cytosol, mitochondrion	26.12	42.07
PGSC0003DMT400000953	Potato	cytosol	32.55	41.76
CDY53440	Canola	mitochondrion	25.91	41.72
CDY47784	Canola	mitochondrion	34.48	41.49
AT4G29150.1	Thale cress	mitochondrion	35.12	41.1
AT1G51960.1	Thale cress	cytosol, mitochondrion	29.55	39.32
CDY45643	Canola	cytosol	26.98	38.65
PGSC0003DMT400042595	Potato	nucleus	12.42	38.16
Bra030407.1-P	Field mustard	cytosol	27.19	37.69
KRH09951	Soybean	cytosol	29.55	36.51
KRH23382	Soybean	cytosol	29.55	36.32
TraesCS1A01G341900.1	Wheat	cytosol	24.2	32.38
TraesCS3A01G275900.1	Wheat	mitochondrion	23.98	29.95
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	29.12	29.89
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	26.98	29.03
TraesCS5A01G377500.1	Wheat	cytosol	28.69	29.0
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	22.91	26.62
TraesCS5A01G163000.1	Wheat	nucleus	26.55	26.05
TraesCS7A01G332500.1	Wheat	cytosol, mitochondrion	20.13	21.22
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	19.27	15.54
TraesCS3A01G244100.1	Wheat	cytosol, plastid	17.56	14.96
TraesCS5A01G502100.1	Wheat	cytosol, plastid	12.21	14.84
TraesCS2A01G492300.1	Wheat	nucleus	19.91	10.8

Protein Annotations

EnsemblPlants:TraesCS3A01G108100.1	EnsemblPlantsGene:TraesCS3A01G108100	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF27	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr3A:+:73512461..73514334

Molecular Weight (calculated)

49933.9 Da

IEP (calculated)

10.702

GRAVY (calculated)

-0.518

Length

467 amino acids

Sequence
(BLAST)

001: MGKAARWLRG LLGGGGKKEQ GKEQRQPATA AAPHGDRKRW SFCKSTRDSA EAEAAAAAAA LSGNAAIARA AEAAWLKSLY NETEREQSKH AIAVAAATAA
101: AADAAVAAAQ AAVEVVRLTS KGPTSTVLAG AVAEPRGRAS AAVKIQTAFR GFLAKKALRA LKGLVKLQAL VRGYLVRKQA AATLQSMQAL VRAQACIRAA
201: RSRAAALPTN LRVHPTPVRP RYSLQERCSS TEDSRSDHGV APYYSRRLSA SVESSSCYGY DRSPKIVEMD TGRPKSRSSS LRTTSPGASE ECYAHSASSP
301: LMPCRPPPRI AAPTARHFPE YEWCEKARPA TAQSTPRYAS YAPVTPTKSA CGDHGYTYSN SPSALNCPSY MSGTRSSVAK VRSQSAPKQR PEEGAVRKRV
401: PLSEVIILQE ARASLGGGGG AQRSCNRPAQ EEAFSFKKAV VSRFDRSSEA AERDRDRDRD LFLQKGW

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.