Factsheet for TraesCS5A01G502100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G327500.1	Wheat	mitochondrion	92.71	89.67
TraesCS4B01G330700.1	Wheat	mitochondrion	91.15	88.38
HORVU4Hr1G081190.1	Barley	mitochondrion	85.42	84.32
Zm00001d048352_P001	Maize	mitochondrion	41.15	57.45
OQU93295	Sorghum	plastid	42.19	57.24
Os03t0134800-00	Rice	mitochondrion	42.97	54.46
AT3G51380.1	Thale cress	mitochondrion	13.28	49.51
Bra012855.1-P	Field mustard	mitochondrion	13.02	48.54
CDX90650	Canola	mitochondrion	13.02	48.54
CDY29016	Canola	mitochondrion	12.76	47.57
GSMUA_Achr1P02670_001	Banana	mitochondrion	16.41	44.06
PGSC0003DMT400009431	Potato	mitochondrion	14.32	41.98
VIT_00s0684g00020.t01	Wine grape	mitochondrion	13.28	37.23
CDX73724	Canola	mitochondrion	12.5	36.92
GSMUA_Achr11P...	Banana	mitochondrion	17.97	34.67
CDX78003	Canola	mitochondrion	13.54	34.21
KRH07958	Soybean	mitochondrion	12.5	34.04
Bra036812.1-P	Field mustard	mitochondrion	13.54	33.77
TraesCS3A01G275900.1	Wheat	mitochondrion	11.98	12.3
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	14.84	12.21
TraesCS1A01G341900.1	Wheat	cytosol	10.94	12.03
TraesCS5A01G377500.1	Wheat	cytosol	13.28	11.04
TraesCS4A01G028700.1	Wheat	cytosol, mitochondrion	13.02	10.99
TraesCS5A01G055100.1	Wheat	cytosol, mitochondrion	11.46	10.95
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	12.24	10.83
TraesCS1A01G122900.1	Wheat	cytosol, plastid	12.5	10.57
TraesCS5A01G163000.1	Wheat	nucleus	12.76	10.29
TraesCS7A01G332500.1	Wheat	cytosol, mitochondrion	11.46	9.93
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	10.68	7.08
TraesCS3A01G244100.1	Wheat	cytosol, plastid	9.64	6.75
TraesCS2A01G492300.1	Wheat	nucleus	8.85	3.95

Protein Annotations

EnsemblPlants:TraesCS5A01G502100.1	EnsemblPlantsGene:TraesCS5A01G502100	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR10699	PANTHER:PTHR10699:SF11	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr5A:+:667123880..667125226

Molecular Weight (calculated)

39567.4 Da

IEP (calculated)

11.905

GRAVY (calculated)

-0.267

Length

384 amino acids

Sequence
(BLAST)

001: MPSKPSGDAR RRSSAACICC IGPHHRASGG SALAPVDTDN SSVRTPLTSC CGTGDAVRTP RTPKTPSARR LCGVRSRTPR RAQQVRRFPA APAPAPAAPA
101: APAREVAPAA PARTPVASAG AALAVPPVKT PVSAAASAAV PQVAPPPVRT PVAAAASTGA PLVAPPPPPA RTPVVAAASA GAALAPPPAR TPRTPSTPIG
201: RTQRVCCVTT AAPAQAGNAK SKSGTARRSW LSSASKAVAQ TRRADSGAVR ESSTNPRANG DVAKAIHRAA PLAQAVEPAP AKEDESVCSN EEYALLCREG
301: FSREDVAAVT IQAYFRAHLA RRAFKALRSL VRLQAVARGA YVRRQAEVAV HCMQAMARLQ ARVRSRQTLA KPKDNDDKLL LLQN

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.