Factsheet for Bra036812.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 6
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78003	Canola	mitochondrion	98.05	99.34
CDX73724	Canola	mitochondrion	79.22	93.85
Bra012855.1-P	Field mustard	mitochondrion	59.74	89.32
AT3G51380.1	Thale cress	mitochondrion	57.14	85.44
VIT_00s0684g00020.t01	Wine grape	mitochondrion	44.81	50.37
PGSC0003DMT400009431	Potato	mitochondrion	40.91	48.09
KRH07958	Soybean	mitochondrion	39.61	43.26
GSMUA_Achr1P02670_001	Banana	mitochondrion	37.66	40.56
GSMUA_Achr11P...	Banana	mitochondrion	38.96	30.15
Zm00001d048352_P001	Maize	mitochondrion	33.77	18.91
OQU93295	Sorghum	plastid	34.42	18.73
TraesCS5A01G502100.1	Wheat	cytosol, plastid	33.77	13.54
HORVU4Hr1G081190.1	Barley	mitochondrion	33.12	13.11
Bra014304.1-P	Field mustard	cytosol, mitochondrion	24.68	13.1
TraesCS4D01G327500.1	Wheat	mitochondrion	33.77	13.1
Bra009281.1-P	Field mustard	mitochondrion	29.87	12.99
Bra039715.1-P	Field mustard	nucleus, plastid	31.17	12.97
TraesCS4B01G330700.1	Wheat	mitochondrion	33.12	12.88
Bra036898.1-P	Field mustard	cytosol	30.52	12.84
Bra005929.1-P	Field mustard	plastid	27.92	12.54
Bra030407.1-P	Field mustard	cytosol	26.62	12.17
Bra021181.1-P	Field mustard	cytosol	27.27	10.8
Bra001633.1-P	Field mustard	cytosol	25.97	10.72
Bra010055.1-P	Field mustard	plastid	27.92	10.62
Bra019337.1-P	Field mustard	nucleus	32.47	10.62
Bra022163.1-P	Field mustard	cytosol	25.97	10.34
Bra020822.1-P	Field mustard	mitochondrion, plastid	27.92	10.24
Bra023414.1-P	Field mustard	nucleus	25.97	10.13
Bra013672.1-P	Field mustard	mitochondrion, nucleus	32.47	10.08
Bra024161.1-P	Field mustard	mitochondrion	25.32	10.05
Bra028807.1-P	Field mustard	mitochondrion	22.73	9.21
Bra006201.1-P	Field mustard	nucleus	26.62	9.17
Bra009498.1-P	Field mustard	cytosol, mitochondrion	20.13	8.12
Bra008163.1-P	Field mustard	cytosol	26.62	7.95
Bra025690.1-P	Field mustard	cytosol, mitochondrion	24.68	6.74
Bra026581.1-P	Field mustard	cytosol	24.68	6.57
Bra024806.1-P	Field mustard	cytosol, plastid	24.03	6.32
Bra016536.1-P	Field mustard	nucleus	25.32	5.79
Bra019653.1-P	Field mustard	cytosol	22.73	5.57
Bra017409.1-P	Field mustard	cytosol, plastid	18.83	5.13
Bra025777.1-P	Field mustard	nucleus, plastid	22.73	4.7
Bra016490.1-P	Field mustard	nucleus	21.43	4.47
Os05t0100008-00	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra036812.1	EnsemblPlants:Bra036812.1-P	EnsemblPlantsGene:Bra036812	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86
PFAM:PF00612	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI0002542CCC
UniProt:M4F6V2	MapMan:35.2	:	:	:	:

Description

AT3G51380 (E=2e-023) IQD20 | IQD20 (IQ-domain 20); calmodulin binding

Coordinates

chrA09:-:25645676..25646714

Molecular Weight (calculated)

17666.8 Da

IEP (calculated)

12.451

GRAVY (calculated)

-0.538

Length

154 amino acids

Sequence
(BLAST)

001: MANSKRLFGV VRRKLLSRSP SSITTIRSSI PETTKEHIAA IKIQAYFRGH LARRAFRALR SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARRS
101: TRNKERREST EILTRLNQIT KRVVRGVVRE DLSEPGQYQR GLSSGADSKE DMRK

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.