Factsheet for Bra019337.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98786	Canola	nucleus	92.57	91.79
CDX98787	Canola	mitochondrion	56.48	89.86
CDX94150	Canola	nucleus	85.77	87.07
Bra013672.1-P	Field mustard	mitochondrion, nucleus	79.62	75.6
Bra020822.1-P	Field mustard	mitochondrion, plastid	66.88	75.0
AT4G23060.1	Thale cress	mitochondrion, nucleus	77.07	75.0
GSMUA_Achr8P11920_001	Banana	cytosol	33.76	44.29
VIT_02s0025g04120.t01	Wine grape	mitochondrion	46.07	43.93
Bra012855.1-P	Field mustard	mitochondrion	9.55	43.69
KRH03972	Soybean	cytosol	40.34	42.51
KRH77498	Soybean	cytosol, mitochondrion	35.03	41.67
KRH57246	Soybean	cytosol	38.64	40.9
Zm00001d002630_P002	Maize	mitochondrion	39.07	40.26
EES12687	Sorghum	cytosol, mitochondrion	39.92	40.26
Solyc08g007920.1.1	Tomato	cytosol	19.96	40.17
Solyc08g080470.2.1	Tomato	plastid	42.46	40.08
PGSC0003DMT400007855	Potato	cytosol, plastid	42.46	40.0
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	38.43	39.43
Solyc08g007930.1.1	Tomato	cytosol	18.9	39.21
Os04t0569900-01	Rice	cytosol, mitochondrion	38.43	39.01
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	36.94	37.83
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	34.39	37.76
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	35.03	37.67
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	36.94	37.66
PGSC0003DMT400014796	Potato	cytosol	28.66	37.5
Zm00001d026084_P001	Maize	mitochondrion	39.28	37.3
HORVU0Hr1G005320.2	Barley	cytosol	28.24	36.54
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	32.06	35.7
Bra009281.1-P	Field mustard	mitochondrion	26.33	35.03
Bra005929.1-P	Field mustard	plastid	25.27	34.69
Bra010055.1-P	Field mustard	plastid	29.09	33.83
Bra036812.1-P	Field mustard	mitochondrion	10.62	32.47
Bra022163.1-P	Field mustard	cytosol	25.27	30.75
Bra001633.1-P	Field mustard	cytosol	23.35	29.49
Bra014304.1-P	Field mustard	cytosol, mitochondrion	18.05	29.31
Bra021181.1-P	Field mustard	cytosol	23.99	29.05
Bra039715.1-P	Field mustard	nucleus, plastid	21.02	26.76
Bra030407.1-P	Field mustard	cytosol	18.9	26.41
Bra024161.1-P	Field mustard	mitochondrion	21.66	26.29
Bra036898.1-P	Field mustard	cytosol	19.96	25.68
Bra009498.1-P	Field mustard	cytosol, mitochondrion	17.62	21.73
Bra028807.1-P	Field mustard	mitochondrion	17.41	21.58
Bra023414.1-P	Field mustard	nucleus	14.86	17.72
Bra006201.1-P	Field mustard	nucleus	15.5	16.33
Bra008163.1-P	Field mustard	cytosol	14.86	13.57
Bra025690.1-P	Field mustard	cytosol, mitochondrion	14.86	12.41
Bra026581.1-P	Field mustard	cytosol	14.86	12.11
Bra024806.1-P	Field mustard	cytosol, plastid	13.38	10.77
Bra016536.1-P	Field mustard	nucleus	15.29	10.7
Bra017409.1-P	Field mustard	cytosol, plastid	12.74	10.62
Bra019653.1-P	Field mustard	cytosol	14.01	10.51
Bra016490.1-P	Field mustard	nucleus	16.14	10.28
Bra025777.1-P	Field mustard	nucleus, plastid	14.23	9.01

Protein Annotations

EnsemblPlants:Bra019337.1	EnsemblPlants:Bra019337.1-P	EnsemblPlantsGene:Bra019337	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009719	GO:GO:0009739	InterPro:DUF4005	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096
SEG:seg	SMART:SM00015	UniParc:UPI0002540E16	UniProt:M4DS44	MapMan:35.2	:

Description

AT4G23060 (E=2e-152) IQD22 | IQD22 (IQ-domain 22); calmodulin binding

Coordinates

chrA03:+:24835322..24837877

Molecular Weight (calculated)

52592.5 Da

IEP (calculated)

10.614

GRAVY (calculated)

-0.801

Length

471 amino acids

Sequence
(BLAST)

001: MGKASRWFRN LLGLKNPDPG YPDPSFETPS RSNPKRRWSF VKSKRENGTA PQSYYPHTPT SLPNSTPPPY QKSSPSSNGR RWKQKLVWEE EGDVNPDKHA
101: ISMAAATALV AEAAVTAAVR LTSTSGRLTR SPVAAHFSDG YSHVVAHDSS FDGHRRDNRE DLAVIKIQSI FRGYLARRAL RALRGLVKLQ AIVRGHIERK
201: RMSVHLRRMH ALVRAQARVR ATRAIVTPES SSSQSNNTKS SHFQNTDPPT PEKQEHSISS CSSKLDHSHI FKRNGSLANN NNKPFSAMNK EEKVLEIDRR
301: HNNSYTRDNR PDMFYSSHLV LDNSGRSGPV YAFPFSPSSS HEETVNQFCT VENSPQPHSA TSIRKGSAFT ASSIALSDCT KSCCYVDHPR FMACTESSRA
401: KARSASAPKS RPQLYHEQSS SKRFGFVDVS YCGDTRSGPQ KVYALHTSFM NKAYPGSGRL DRLGMPTGYR Y

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.