Factsheet for Bra005929.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78285	Canola	plastid	99.71	99.42
Bra009281.1-P	Field mustard	mitochondrion	83.09	80.51
AT5G07240.2	Thale cress	plastid	80.47	61.74
Bra010055.1-P	Field mustard	plastid	67.64	57.28
Bra012855.1-P	Field mustard	mitochondrion	12.54	41.75
KRG91452	Soybean	cytosol	51.9	39.04
KRH09113	Soybean	cytosol	54.23	38.99
KRH35361	Soybean	cytosol, mitochondrion	51.9	38.36
KRH38565	Soybean	cytosol	53.64	38.17
GSMUA_Achr8P11920_001	Banana	cytosol	38.78	37.05
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	41.4	33.1
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	41.4	32.42
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	45.48	32.1
Bra014304.1-P	Field mustard	cytosol, mitochondrion	27.11	32.07
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	42.86	32.03
EES12687	Sorghum	cytosol, mitochondrion	43.44	31.91
VIT_16s0100g00620.t01	Wine grape	cytosol	30.9	31.83
Os04t0569900-01	Rice	cytosol, mitochondrion	42.57	31.47
Zm00001d002630_P002	Maize	mitochondrion	41.4	31.07
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	42.86	30.88
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	41.4	30.87
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	41.4	30.74
HORVU0Hr1G005320.2	Barley	cytosol	31.49	29.67
Zm00001d026084_P001	Maize	mitochondrion	42.27	29.23
Bra001633.1-P	Field mustard	cytosol	31.78	29.22
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	35.86	29.08
Bra022163.1-P	Field mustard	cytosol	32.36	28.68
Bra013672.1-P	Field mustard	mitochondrion, nucleus	41.4	28.63
Bra030407.1-P	Field mustard	cytosol	27.7	28.19
Bra021181.1-P	Field mustard	cytosol	31.78	28.02
Bra036812.1-P	Field mustard	mitochondrion	12.54	27.92
Bra020822.1-P	Field mustard	mitochondrion, plastid	32.94	26.9
Bra024161.1-P	Field mustard	mitochondrion	29.74	26.29
Bra019337.1-P	Field mustard	nucleus	34.69	25.27
Bra039715.1-P	Field mustard	nucleus, plastid	27.11	25.14
Bra036898.1-P	Field mustard	cytosol	25.36	23.77
Bra028807.1-P	Field mustard	mitochondrion	25.95	23.42
Bra009498.1-P	Field mustard	cytosol, mitochondrion	25.07	22.51
Bra023414.1-P	Field mustard	nucleus	21.28	18.48
Bra006201.1-P	Field mustard	nucleus	19.83	15.21
Bra008163.1-P	Field mustard	cytosol	21.28	14.15
Bra026581.1-P	Field mustard	cytosol	20.12	11.94
Bra025690.1-P	Field mustard	cytosol, mitochondrion	18.37	11.17
Bra017409.1-P	Field mustard	cytosol, plastid	18.08	10.97
Bra024806.1-P	Field mustard	cytosol, plastid	18.66	10.94
Bra016536.1-P	Field mustard	nucleus	20.12	10.25
Bra019653.1-P	Field mustard	cytosol	17.2	9.39
Bra016490.1-P	Field mustard	nucleus	18.95	8.8
Bra025777.1-P	Field mustard	nucleus, plastid	17.78	8.2

Protein Annotations

EnsemblPlants:Bra005929.1	EnsemblPlants:Bra005929.1-P	EnsemblPlantsGene:Bra005929	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF11	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
SUPFAM:SSF52540	UniParc:UPI000253F665	UniProt:M4CNZ1	MapMan:35.2	:	:

Description

AT5G07240 (E=3e-036) IQD24 | IQD24 (IQ-domain 24); calmodulin binding

Coordinates

chrA03:+:1272925..1274493

Molecular Weight (calculated)

38580.3 Da

IEP (calculated)

10.946

GRAVY (calculated)

-0.800

Length

343 amino acids

Sequence
(BLAST)

001: MGFFRRLFGS KKQEKTTHTK NKSKKWSFTT RSSNPASSSH PSKRRTDEEI LDVDKHAIAV AAATAAVAEA ALAAAHAAAE VVRLTGRGGG SVTQANRNNR
101: RLAQEFVAAV KIQSSFRGYL ARRALRALKA LVKLQALVKG HIVRKQTADM LRRMQTLVRL QARARASRSS HVPPSPHSLH ARCVSEAEYS KVIAMDHHRS
201: LWNAPQYSED NDKILEVDTW KPHFASYYHK ESSPSKRGSL PTSPQVRSRP GSSSGGGSRR RTPFTPTRSE YEYYSGYYPN YMANTESYRA KVRSQSAPRQ
301: RLHELSSESG YKRSVQGQYY YYTAAAERSF DQRSYLSSDP NLF

Best Arabidopsis Sequence Match ( AT5G07240.1 )
(BLAST)

001: MGFFGRLFGS KKQEKATPNR RRWSFATRSS HPENDSSSHS SKRRGDEDVL NGDKHAIAVA AATAAVAEAA LAAARAAAEV VRLTNGGRNS SVKQISRSNR
101: RWSQEYKAAM KIQSAFRGYL ARRALRALKA LVKLQALVKG HIVRKQTADM LRRMQTLVRL QARARASRSS HVSDSSHPPT LMIPSSPQSF HARCVSEAEY
201: SKVIAMDHHH NNHRSPMGSS RLLDQWRTEE SLWSAPKYNE DDDKILEVDT WKPHFRESPR KRGSLVVPTS VENSPQLRSR TGSSSGGSRR KTPFTPARSE
301: YEYYSGYHPN YMANTESYKA KVRSQSAPRQ RLQDLPSESG YKRSIQGQYY YYTPAAERSF DQRSDNGIAG YRGVSDGLDR NQSDKSKMYT SFFSSNPLFF
401: Q

Arabidopsis Description

IQD24IQ-domain 24 [Source:TAIR;Acc:AT5G07240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.