Factsheet for AT5G07240.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98994	Canola	mitochondrion	64.65	81.64
CDX70019	Canola	cytosol, mitochondrion	64.43	81.36
Bra009281.1-P	Field mustard	mitochondrion	64.43	81.36
Bra005929.1-P	Field mustard	plastid	61.74	80.47
CDX78285	Canola	plastid	61.74	80.23
CDX81042	Canola	plastid	62.64	72.35
AT5G62070.1	Thale cress	cytosol, plastid	60.18	66.75
GSMUA_Achr8P11920_001	Banana	cytosol	31.99	39.83
AT3G51380.1	Thale cress	mitochondrion	9.17	39.81
KRH09113	Soybean	cytosol	41.83	39.2
KRG91452	Soybean	cytosol	39.6	38.82
KRH38565	Soybean	cytosol	41.61	38.59
KRH35361	Soybean	cytosol, mitochondrion	40.04	38.58
VIT_16s0100g00620.t01	Wine grape	cytosol	26.17	35.14
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	34.0	34.7
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	32.89	34.27
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	34.45	33.55
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	35.79	32.92
Zm00001d002630_P002	Maize	mitochondrion	32.66	31.95
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	34.0	31.93
EES12687	Sorghum	cytosol, mitochondrion	33.11	31.69
Os04t0569900-01	Rice	cytosol, mitochondrion	32.89	31.68
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	29.31	30.97
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	31.77	30.87
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	31.77	30.74
Zm00001d026084_P001	Maize	mitochondrion	33.33	30.04
HORVU0Hr1G005320.2	Barley	cytosol	24.38	29.95
AT3G16490.1	Thale cress	cytosol	25.5	29.31
AT4G23060.1	Thale cress	mitochondrion, nucleus	31.54	29.13
AT1G51960.1	Thale cress	cytosol, mitochondrion	21.48	27.35
AT4G29150.1	Thale cress	mitochondrion	23.27	26.07
AT5G03960.2	Thale cress	cytosol, mitochondrion	19.24	21.29
AT4G14750.3	Thale cress	cytosol	21.03	20.43
AT5G13460.1	Thale cress	nucleus	16.11	16.25
AT1G74690.1	Thale cress	cytosol	17.9	13.63
AT1G18840.1	Thale cress	cytosol	17.23	13.46
AT2G02790.1	Thale cress	cytosol	15.66	11.01
AT1G14380.1	Thale cress	cytosol	15.66	10.54
AT1G19870.1	Thale cress	nucleus	16.55	9.32

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EntrezGene:830615	UniProt:A0A1P8BGZ2	ProteinID:AED91126.1	ProteinID:ANM70866.1
ArrayExpress:AT5G07240	EnsemblPlantsGene:AT5G07240	RefSeq:AT5G07240	TAIR:AT5G07240	RefSeq:AT5G07240-TAIR-G	EnsemblPlants:AT5G07240.2
Unigene:At.48993	EMBL:BT006056	ProteinID:CAB87280.1	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	InterPro:IPR000048	Symbol:IQD24	InterPro:IQ_motif_EF-hand-BS	RefSeq:NP_001332444.1
RefSeq:NP_196341.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295
PANTHER:PTHR32295:SF11	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI000848F730	SEG:seg	:

Description

IQD24IQ-domain 24 [Source:TAIR;Acc:AT5G07240]

Coordinates

chr5:+:2271890..2274051

Molecular Weight (calculated)

50770.6 Da

IEP (calculated)

10.954

GRAVY (calculated)

-0.866

Length

447 amino acids

Sequence
(BLAST)

001: MYHTLASPFP IVSSFLFVLV KNKKNNKKNL NRRKFRQEFS SYNELSMGFF GRLFGSKKQE KATPNRRRWS FATRSSHPEN DSSSHSSKRR GDEDVLNGDK
101: HAIAVAAATA AVAEAALAAA RAAAEVVRLT NGGRNSSVKQ ISRSNRRWSQ EYKAAMKIQS AFRGYLARRA LRALKALVKL QALVKGHIVR KQTADMLRRM
201: QTLVRLQARA RASRSSHVSD SSHPPTLMIP SSPQSFHARC VSEAEYSKVI AMDHHHNNHR SPMGSSRLLD QWRTEESLWS APKYNEDDDK ILEVDTWKPH
301: FRESPRKRGS LVVPTSVENS PQLRSRTGSS SGGSRRKTPF TPARSEYEYY SGYHPNYMAN TESYKAKVRS QSAPRQRLQD LPSESGYKRS IQGQYYYYTP
401: AAERSFDQRS DNGIAGYRGV SDGLDRNQSD KSKMYTSFFS SNPLFFQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.