Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90650 | Canola | mitochondrion | 89.32 | 89.32 |
| Bra012855.1-P | Field mustard | mitochondrion | 89.32 | 89.32 |
| CDY29016 | Canola | mitochondrion | 88.35 | 88.35 |
| CDX73724 | Canola | mitochondrion | 83.5 | 66.15 |
| CDX78003 | Canola | mitochondrion | 85.44 | 57.89 |
| Bra036812.1-P | Field mustard | mitochondrion | 85.44 | 57.14 |
| PGSC0003DMT400009431 | Potato | mitochondrion | 64.08 | 50.38 |
| VIT_00s0684g00020.t01 | Wine grape | mitochondrion | 63.11 | 47.45 |
| KRH07958 | Soybean | mitochondrion | 59.22 | 43.26 |
| GSMUA_Achr1P02670_001 | Banana | mitochondrion | 58.25 | 41.96 |
| GSMUA_Achr11P... | Banana | mitochondrion | 58.25 | 30.15 |
| Zm00001d048352_P001 | Maize | mitochondrion | 50.49 | 18.91 |
| OQU93295 | Sorghum | plastid | 51.46 | 18.73 |
| TraesCS5A01G502100.1 | Wheat | cytosol, plastid | 49.51 | 13.28 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 49.51 | 13.11 |
| TraesCS4D01G327500.1 | Wheat | mitochondrion | 49.51 | 12.85 |
| TraesCS4B01G330700.1 | Wheat | mitochondrion | 48.54 | 12.63 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 42.72 | 10.92 |
| AT3G16490.1 | Thale cress | cytosol | 39.81 | 10.54 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 34.95 | 10.26 |
| AT4G14750.3 | Thale cress | cytosol | 42.72 | 9.57 |
| AT5G07240.2 | Thale cress | plastid | 39.81 | 9.17 |
| AT4G29150.1 | Thale cress | mitochondrion | 34.95 | 9.02 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 41.75 | 8.88 |
| AT5G13460.1 | Thale cress | nucleus | 36.89 | 8.58 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 29.13 | 7.43 |
| AT1G74690.1 | Thale cress | cytosol | 37.86 | 6.64 |
| AT1G18840.1 | Thale cress | cytosol | 35.92 | 6.47 |
| AT1G14380.1 | Thale cress | cytosol | 34.95 | 5.42 |
| AT2G02790.1 | Thale cress | cytosol | 30.1 | 4.87 |
| AT1G19870.1 | Thale cress | nucleus | 33.98 | 4.41 |
| Os05t0100008-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EntrezGene:824301 | UniProt:A0A178VJQ2 | ProteinID:AEE78786.1 | ArrayExpress:AT3G51380 |
| EnsemblPlantsGene:AT3G51380 | RefSeq:AT3G51380 | TAIR:AT3G51380 | RefSeq:AT3G51380-TAIR-G | EnsemblPlants:AT3G51380.1 | TAIR:AT3G51380.1 |
| EMBL:BT029478 | ProteinID:CAB63002.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0007339 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | InterPro:IPR000048 |
| Symbol:IQD20 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_190706.1 | ProteinID:OAP05545.1 | PFAM:PF00612 | PIRSF:PIRSF016533 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF86 | UniProt:Q9SD11 | SMART:SM00015 | InterPro:Sp17 |
| UniParc:UPI00000A1489 | SEG:seg | : | : | : | : |
Description
IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
Coordinates
chr3:-:19074036..19074815
Molecular Weight (calculated)
11818.0 Da
IEP (calculated)
12.952
GRAVY (calculated)
-0.083
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH
101: LSH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.