Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29016 | Canola | mitochondrion | 70.0 | 88.35 |
| CDX90650 | Canola | mitochondrion | 69.23 | 87.38 |
| AT3G51380.1 | Thale cress | mitochondrion | 66.15 | 83.5 |
| CDX78003 | Canola | mitochondrion | 93.85 | 80.26 |
| Bra036812.1-P | Field mustard | mitochondrion | 93.85 | 79.22 |
| VIT_00s0684g00020.t01 | Wine grape | mitochondrion | 50.0 | 47.45 |
| PGSC0003DMT400009431 | Potato | mitochondrion | 46.92 | 46.56 |
| KRH07958 | Soybean | mitochondrion | 44.62 | 41.13 |
| GSMUA_Achr1P02670_001 | Banana | mitochondrion | 43.08 | 39.16 |
| GSMUA_Achr11P... | Banana | mitochondrion | 46.15 | 30.15 |
| CDY29768 | Canola | cytosol | 30.0 | 23.35 |
| Zm00001d048352_P001 | Maize | mitochondrion | 38.46 | 18.18 |
| OQU93295 | Sorghum | plastid | 39.23 | 18.02 |
| CDY46537 | Canola | cytosol, mitochondrion | 28.46 | 12.76 |
| TraesCS5A01G502100.1 | Wheat | cytosol, plastid | 36.92 | 12.5 |
| CDX70019 | Canola | cytosol, mitochondrion | 33.85 | 12.43 |
| CDX98994 | Canola | mitochondrion | 33.85 | 12.43 |
| CDY53440 | Canola | mitochondrion | 27.69 | 12.41 |
| CDY50677 | Canola | nucleus | 34.62 | 12.23 |
| TraesCS4D01G327500.1 | Wheat | mitochondrion | 36.92 | 12.09 |
| HORVU4Hr1G081190.1 | Barley | mitochondrion | 36.15 | 12.08 |
| CDY36861 | Canola | nucleus | 34.62 | 12.03 |
| CDY45643 | Canola | cytosol | 30.0 | 11.96 |
| CDX78285 | Canola | plastid | 31.54 | 11.92 |
| TraesCS4B01G330700.1 | Wheat | mitochondrion | 36.15 | 11.87 |
| CDY72577 | Canola | cytosol, mitochondrion | 26.15 | 11.72 |
| CDY64325 | Canola | cytosol | 33.08 | 11.53 |
| CDY43103 | Canola | cytosol | 30.0 | 10.6 |
| CDX81042 | Canola | plastid | 31.54 | 10.59 |
| CDY67178 | Canola | cytosol, mitochondrion | 31.54 | 10.57 |
| CDY68636 | Canola | cytosol | 31.54 | 10.54 |
| CDY00253 | Canola | plastid | 31.54 | 10.41 |
| CDX86928 | Canola | mitochondrion, plastid | 31.54 | 10.41 |
| CDX70272 | Canola | cytosol, mitochondrion | 23.08 | 10.24 |
| CDY41423 | Canola | cytosol, mitochondrion | 23.08 | 10.24 |
| CDX82400 | Canola | cytosol | 29.23 | 10.19 |
| CDY04907 | Canola | endoplasmic reticulum | 26.15 | 10.15 |
| CDY14162 | Canola | endoplasmic reticulum | 26.15 | 10.15 |
| CDX98787 | Canola | mitochondrion | 23.08 | 10.14 |
| CDX75883 | Canola | cytosol | 29.23 | 10.13 |
| CDX94150 | Canola | nucleus | 36.15 | 10.13 |
| CDX92076 | Canola | cytosol | 30.0 | 10.08 |
| CDY41368 | Canola | mitochondrion, plastid | 32.31 | 10.0 |
| CDY00251 | Canola | plastid | 31.54 | 9.98 |
| CDX98786 | Canola | nucleus | 36.15 | 9.89 |
| CDY53133 | Canola | nucleus | 36.92 | 9.88 |
| CDY41252 | Canola | cytosol, mitochondrion | 36.92 | 9.84 |
| CDY30233 | Canola | mitochondrion | 29.23 | 9.79 |
| CDX76341 | Canola | mitochondrion, plastid | 31.54 | 9.76 |
| CDY47784 | Canola | mitochondrion | 28.46 | 9.54 |
| CDX85648 | Canola | nucleus | 28.46 | 9.37 |
| CDX91120 | Canola | nucleus | 26.92 | 9.33 |
| CDY41417 | Canola | mitochondrion | 20.77 | 9.03 |
| CDX70505 | Canola | nucleus | 30.0 | 8.74 |
| CDX78523 | Canola | nucleus | 30.0 | 8.74 |
| CDX83805 | Canola | cytosol, mitochondrion | 27.69 | 6.45 |
| CDY19251 | Canola | cytosol, mitochondrion | 26.92 | 6.25 |
| CDY26720 | Canola | cytosol, mitochondrion | 26.92 | 6.21 |
| CDY03037 | Canola | cytosol | 26.92 | 6.06 |
| CDY45197 | Canola | nucleus, plastid | 26.92 | 6.0 |
| CDY41676 | Canola | cytosol, plastid | 26.15 | 5.91 |
| CDY67405 | Canola | cytosol | 26.15 | 5.87 |
| CDY39317 | Canola | cytosol | 26.15 | 5.6 |
| CDY49085 | Canola | cytosol | 26.15 | 5.55 |
| CDX96693 | Canola | nucleus | 27.69 | 5.35 |
| CDY04138 | Canola | cytosol, plastid | 22.31 | 5.17 |
| CDY04137 | Canola | cytosol, plastid | 22.31 | 5.15 |
| CDY17427 | Canola | cytosol, plastid | 22.31 | 5.11 |
| CDX83739 | Canola | nucleus | 25.38 | 4.47 |
| CDY44186 | Canola | nucleus, plastid | 24.62 | 4.38 |
| CDY62588 | Canola | nucleus | 24.62 | 4.32 |
| CDY29389 | Canola | nucleus, plastid | 24.62 | 4.28 |
| CDX75112 | Canola | cytosol | 1.54 | 1.44 |
| Os05t0100008-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.2 | EnsemblPlants:CDX73724 | ProteinID:CDX73724 | ProteinID:CDX73724.1 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0007339 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00109328001 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase |
| PFAM:PF00612 | PIRSF:PIRSF016533 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF86 | SMART:SM00015 |
| SUPFAM:SSF52540 | InterPro:Sp17 | UniParc:UPI0004EE61AE | SEG:seg | : | : |
Description
BnaC08g22790D
Coordinates
chrLK031799:+:2364033..2364979
Molecular Weight (calculated)
15047.8 Da
IEP (calculated)
12.669
GRAVY (calculated)
-0.269
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSKRLFGV VRRKLLSRSP SSITTIRSSI PETTKEHIAA IKIQAYFRGH LGRRAFRALR SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRAHTT
101: RNKERRESTE ILTRLNQITK RVVSVWFEKI
101: RNKERRESTE ILTRLNQITK RVVSVWFEKI
001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH
101: LSH
Arabidopsis Description
IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.