Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98786 | Canola | nucleus | 94.26 | 58.74 |
| Bra019337.1-P | Field mustard | nucleus | 89.86 | 56.48 |
| CDX94150 | Canola | nucleus | 84.8 | 54.09 |
| CDY53133 | Canola | nucleus | 83.45 | 50.82 |
| CDY41252 | Canola | cytosol, mitochondrion | 83.45 | 50.61 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 80.07 | 48.97 |
| CDY41368 | Canola | mitochondrion, plastid | 67.91 | 47.86 |
| CDX76341 | Canola | mitochondrion, plastid | 66.55 | 46.9 |
| CDX75112 | Canola | cytosol | 20.27 | 43.17 |
| KRH77498 | Soybean | cytosol, mitochondrion | 42.23 | 31.57 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 37.16 | 30.22 |
| VIT_02s0025g04120.t01 | Wine grape | mitochondrion | 48.99 | 29.35 |
| GSMUA_Achr8P11920_001 | Banana | cytosol | 34.8 | 28.69 |
| KRH03972 | Soybean | cytosol | 42.57 | 28.19 |
| CDX90650 | Canola | mitochondrion | 9.8 | 28.16 |
| PGSC0003DMT400014796 | Potato | cytosol | 33.78 | 27.78 |
| KRH57246 | Soybean | cytosol | 41.22 | 27.42 |
| CDY29016 | Canola | mitochondrion | 9.46 | 27.18 |
| Solyc08g007920.1.1 | Tomato | cytosol | 20.95 | 26.5 |
| Solyc08g080470.2.1 | Tomato | plastid | 44.59 | 26.45 |
| PGSC0003DMT400007855 | Potato | cytosol, plastid | 44.59 | 26.4 |
| Zm00001d002630_P002 | Maize | mitochondrion | 40.2 | 26.04 |
| Solyc08g007930.1.1 | Tomato | cytosol | 19.59 | 25.55 |
| EES12687 | Sorghum | cytosol, mitochondrion | 40.2 | 25.48 |
| GSMUA_Achr5P20090_001 | Banana | cytosol, mitochondrion | 39.19 | 25.27 |
| Os04t0569900-01 | Rice | cytosol, mitochondrion | 38.85 | 24.78 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 38.18 | 24.46 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 34.8 | 24.35 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 37.5 | 24.13 |
| GSMUA_Achr3P18210_001 | Banana | cytosol, mitochondrion | 34.8 | 24.01 |
| Zm00001d026084_P001 | Maize | mitochondrion | 40.2 | 23.99 |
| GSMUA_Achr5P13660_001 | Banana | cytosol, mitochondrion | 34.8 | 23.52 |
| CDX73724 | Canola | mitochondrion | 10.14 | 23.08 |
| CDX78003 | Canola | mitochondrion | 10.81 | 21.05 |
| CDX98994 | Canola | mitochondrion | 24.66 | 20.62 |
| CDX70019 | Canola | cytosol, mitochondrion | 24.66 | 20.62 |
| CDX78285 | Canola | plastid | 23.65 | 20.35 |
| CDX86928 | Canola | mitochondrion, plastid | 27.03 | 20.3 |
| CDY43103 | Canola | cytosol | 25.0 | 20.11 |
| CDY00253 | Canola | plastid | 26.69 | 20.05 |
| CDX92076 | Canola | cytosol | 25.34 | 19.38 |
| CDY00251 | Canola | plastid | 26.69 | 19.22 |
| CDY68636 | Canola | cytosol | 24.66 | 18.77 |
| CDX75883 | Canola | cytosol | 23.65 | 18.67 |
| CDY67178 | Canola | cytosol, mitochondrion | 24.32 | 18.56 |
| CDX82400 | Canola | cytosol | 23.31 | 18.5 |
| CDX81042 | Canola | plastid | 23.65 | 18.09 |
| CDY50677 | Canola | nucleus | 22.3 | 17.93 |
| CDY36861 | Canola | nucleus | 22.3 | 17.65 |
| CDY46537 | Canola | cytosol, mitochondrion | 17.23 | 17.59 |
| CDY53440 | Canola | mitochondrion | 16.89 | 17.24 |
| CDY64325 | Canola | cytosol | 21.28 | 16.89 |
| CDY47784 | Canola | mitochondrion | 21.96 | 16.75 |
| CDY30233 | Canola | mitochondrion | 21.96 | 16.75 |
| CDY45643 | Canola | cytosol | 18.24 | 16.56 |
| CDY29768 | Canola | cytosol | 8.45 | 14.97 |
| CDX85648 | Canola | nucleus | 16.22 | 12.15 |
| CDX91120 | Canola | nucleus | 15.2 | 12.0 |
| CDY41423 | Canola | cytosol, mitochondrion | 11.82 | 11.95 |
| CDX78523 | Canola | nucleus | 17.91 | 11.88 |
| CDX70505 | Canola | nucleus | 17.91 | 11.88 |
| CDX70272 | Canola | cytosol, mitochondrion | 11.49 | 11.6 |
| CDY41417 | Canola | mitochondrion | 10.81 | 10.7 |
| CDY72577 | Canola | cytosol, mitochondrion | 10.47 | 10.69 |
| CDY04907 | Canola | endoplasmic reticulum | 11.49 | 10.15 |
| CDY14162 | Canola | endoplasmic reticulum | 11.49 | 10.15 |
| CDX83805 | Canola | cytosol, mitochondrion | 17.23 | 9.14 |
| CDY19251 | Canola | cytosol, mitochondrion | 17.23 | 9.11 |
| CDY41676 | Canola | cytosol, plastid | 17.23 | 8.87 |
| CDY67405 | Canola | cytosol | 17.23 | 8.81 |
| CDY04138 | Canola | cytosol, plastid | 16.55 | 8.73 |
| CDY26720 | Canola | cytosol, mitochondrion | 16.55 | 8.69 |
| CDY04137 | Canola | cytosol, plastid | 16.22 | 8.53 |
| CDY49085 | Canola | cytosol | 17.57 | 8.48 |
| CDY17427 | Canola | cytosol, plastid | 16.22 | 8.47 |
| CDY39317 | Canola | cytosol | 16.55 | 8.07 |
| CDY45197 | Canola | nucleus, plastid | 15.54 | 7.89 |
| CDY03037 | Canola | cytosol | 15.2 | 7.79 |
| CDX96693 | Canola | nucleus | 17.23 | 7.58 |
| CDX83739 | Canola | nucleus | 17.91 | 7.17 |
| CDY62588 | Canola | nucleus | 17.57 | 7.02 |
| CDY44186 | Canola | nucleus, plastid | 17.23 | 6.98 |
| CDY29389 | Canola | nucleus, plastid | 17.23 | 6.82 |
Protein Annotations
| EnsemblPlants:CDX98787 | EnsemblPlantsGene:GSBRNA2T00106877001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF13 | PFAM:PF13178 | PFscan:PS50096 |
| ProteinID:CDX98787 | ProteinID:CDX98787.1 | SEG:seg | UniParc:UPI0004EEB6F6 | MapMan:35.2 | : |
Description
BnaA03g45720D
Coordinates
chrLK031906:+:1276578..1277716
Molecular Weight (calculated)
33116.1 Da
IEP (calculated)
10.623
GRAVY (calculated)
-0.758
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKARRALR ALKGLVKLQA ILRGHIERKR MSIHLRRMHA LVRAQARVRA TRVIVTPESS SSQSNNTKSS HFQNTDPPMP KKQEHSISSS SKLDHSYIFK
101: RNSSLANNNR PLSAMNEEEK VLEIDRSHNN SYTRRNRPDM FYSSHMVPDN SGRSGPVYAF PFSPSSSHEE TVNQFCTAEN SPQLHSSTSI SQGSAFTASS
201: VAPSDCTKSC CYTDHPRFMA CTESSRARSA SAPKSRPQLY HEQSSLKRFG LVDVPYCGDT RSGPQKVSAV HTSFMNKAYP GSGRLDRLGM PTGYRY
101: RNSSLANNNR PLSAMNEEEK VLEIDRSHNN SYTRRNRPDM FYSSHMVPDN SGRSGPVYAF PFSPSSSHEE TVNQFCTAEN SPQLHSSTSI SQGSAFTASS
201: VAPSDCTKSC CYTDHPRFMA CTESSRARSA SAPKSRPQLY HEQSSLKRFG LVDVPYCGDT RSGPQKVSAV HTSFMNKAYP GSGRLDRLGM PTGYRY
001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY
Arabidopsis Description
IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.