Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021181.1-P | Field mustard | cytosol | 99.74 | 99.74 |
| CDY67178 | Canola | cytosol, mitochondrion | 94.6 | 94.85 |
| AT3G16490.1 | Thale cress | cytosol | 89.97 | 89.97 |
| CDY43103 | Canola | cytosol | 83.03 | 87.77 |
| CDX92076 | Canola | cytosol | 86.63 | 87.08 |
| CDX75883 | Canola | cytosol | 83.29 | 86.4 |
| CDX82400 | Canola | cytosol | 80.72 | 84.18 |
| VIT_09s0002g03360.t01 | Wine grape | cytosol, mitochondrion | 58.61 | 56.72 |
| Solyc06g066430.2.1 | Tomato | nucleus | 55.53 | 55.1 |
| KRH47199 | Soybean | cytosol | 55.78 | 54.8 |
| KRH44268 | Soybean | cytosol | 54.76 | 52.99 |
| CDY46537 | Canola | cytosol, mitochondrion | 39.33 | 52.76 |
| CDY53440 | Canola | mitochondrion | 39.07 | 52.41 |
| CDY45643 | Canola | cytosol | 40.36 | 48.16 |
| PGSC0003DMT400042595 | Potato | nucleus | 18.77 | 48.03 |
| GSMUA_Achr6P14870_001 | Banana | cytosol, mitochondrion | 40.62 | 42.13 |
| CDX90650 | Canola | mitochondrion | 11.05 | 41.75 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 48.07 | 41.19 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 48.07 | 41.19 |
| TraesCS1A01G122900.1 | Wheat | cytosol, plastid | 47.81 | 40.97 |
| GSMUA_Achr10P... | Banana | cytosol | 46.27 | 40.82 |
| CDY29016 | Canola | mitochondrion | 10.8 | 40.78 |
| Os05t0187500-01 | Rice | cytosol | 48.59 | 40.21 |
| CDY30233 | Canola | mitochondrion | 39.85 | 39.95 |
| GSMUA_Achr5P06520_001 | Banana | cytosol, mitochondrion | 41.65 | 39.9 |
| Zm00001d037688_P001 | Maize | mitochondrion | 47.3 | 39.83 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 46.79 | 39.48 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 46.79 | 39.31 |
| CDY47784 | Canola | mitochondrion | 39.07 | 39.18 |
| Os01t0190500-01 | Rice | cytosol, mitochondrion | 46.79 | 39.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.05 | 39.05 |
| TraesCS3A01G108100.1 | Wheat | cytosol, mitochondrion | 46.79 | 38.97 |
| GSMUA_Achr3P17570_001 | Banana | cytosol, mitochondrion | 40.36 | 38.86 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 36.76 | 38.75 |
| GSMUA_Achr7P13670_001 | Banana | cytosol, mitochondrion | 37.53 | 38.73 |
| Zm00001d010366_P001 | Maize | cytosol, mitochondrion | 46.53 | 38.59 |
| KXG21487 | Sorghum | cytosol, mitochondrion | 48.07 | 37.93 |
| EES02320 | Sorghum | mitochondrion | 46.79 | 37.92 |
| GSMUA_Achr8P20170_001 | Banana | cytosol, mitochondrion | 37.79 | 36.75 |
| Zm00001d039510_P001 | Maize | cytosol, mitochondrion | 44.73 | 36.17 |
| Zm00001d008819_P001 | Maize | mitochondrion | 43.19 | 36.05 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 48.07 | 35.48 |
| CDX78285 | Canola | plastid | 28.28 | 31.98 |
| CDX73724 | Canola | mitochondrion | 10.54 | 31.54 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 46.02 | 31.24 |
| CDX70019 | Canola | cytosol, mitochondrion | 28.02 | 30.79 |
| CDX98994 | Canola | mitochondrion | 28.02 | 30.79 |
| CDY29768 | Canola | cytosol | 12.85 | 29.94 |
| CDY00253 | Canola | plastid | 29.82 | 29.44 |
| CDX86928 | Canola | mitochondrion, plastid | 29.56 | 29.19 |
| CDY00251 | Canola | plastid | 29.82 | 28.22 |
| CDX81042 | Canola | plastid | 28.02 | 28.17 |
| CDX78003 | Canola | mitochondrion | 10.8 | 27.63 |
| CDY50677 | Canola | nucleus | 25.71 | 27.17 |
| CDY36861 | Canola | nucleus | 25.71 | 26.74 |
| CDY41252 | Canola | cytosol, mitochondrion | 32.9 | 26.23 |
| CDY53133 | Canola | nucleus | 32.39 | 25.93 |
| CDY41368 | Canola | mitochondrion, plastid | 27.51 | 25.48 |
| CDX70272 | Canola | cytosol, mitochondrion | 19.02 | 25.26 |
| CDY41423 | Canola | cytosol, mitochondrion | 19.02 | 25.26 |
| CDX98786 | Canola | nucleus | 30.59 | 25.05 |
| CDY64325 | Canola | cytosol | 23.91 | 24.93 |
| CDX98787 | Canola | mitochondrion | 18.77 | 24.66 |
| CDX94150 | Canola | nucleus | 29.31 | 24.57 |
| CDX76341 | Canola | mitochondrion, plastid | 26.48 | 24.52 |
| CDY72577 | Canola | cytosol, mitochondrion | 17.74 | 23.79 |
| CDY04907 | Canola | endoplasmic reticulum | 20.05 | 23.28 |
| CDY14162 | Canola | endoplasmic reticulum | 20.05 | 23.28 |
| CDX91120 | Canola | nucleus | 18.77 | 19.47 |
| CDY41417 | Canola | mitochondrion | 14.91 | 19.4 |
| CDX85648 | Canola | nucleus | 19.54 | 19.24 |
| CDX78523 | Canola | nucleus | 19.79 | 17.26 |
| CDX70505 | Canola | nucleus | 19.79 | 17.26 |
| CDX83805 | Canola | cytosol, mitochondrion | 20.31 | 14.16 |
| CDY19251 | Canola | cytosol, mitochondrion | 19.79 | 13.75 |
| CDY26720 | Canola | cytosol, mitochondrion | 19.28 | 13.3 |
| CDY03037 | Canola | cytosol | 17.48 | 11.76 |
| CDY04137 | Canola | cytosol, plastid | 16.97 | 11.72 |
| CDY17427 | Canola | cytosol, plastid | 16.97 | 11.64 |
| CDX96693 | Canola | nucleus | 20.05 | 11.59 |
| CDY04138 | Canola | cytosol, plastid | 16.71 | 11.59 |
| CDY67405 | Canola | cytosol | 17.22 | 11.57 |
| CDY45197 | Canola | nucleus, plastid | 17.22 | 11.49 |
| CDY41676 | Canola | cytosol, plastid | 16.97 | 11.48 |
| CDY49085 | Canola | cytosol | 16.2 | 10.28 |
| CDY44186 | Canola | nucleus, plastid | 19.28 | 10.26 |
| CDX83739 | Canola | nucleus | 19.28 | 10.15 |
| CDY62588 | Canola | nucleus | 18.77 | 9.85 |
| CDY29389 | Canola | nucleus, plastid | 18.77 | 9.76 |
| CDY39317 | Canola | cytosol | 14.91 | 9.56 |
| CDX75112 | Canola | cytosol | 3.08 | 8.63 |
Protein Annotations
| EnsemblPlants:CDY68636 | EnsemblPlantsGene:GSBRNA2T00076516001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF10 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY68636 | ProteinID:CDY68636.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EEFCFB | UniProt:A0A078JSL6 | MapMan:35.2 | : | : | : |
Description
BnaAnng27880DBnaAnng27880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSL6]
Coordinates
chrLK037701:-:3642..5177
Molecular Weight (calculated)
43511.4 Da
IEP (calculated)
10.688
GRAVY (calculated)
-0.680
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAARWFKG IFGMKKSKEK ENRVSGDGEY SGNGGGEAGG SLIHRKVLQA DSVWLRTYLA ETDKEQNKHA IAVAAATAAA ADAAVAAAQA AVAVVRLTSN
101: GRASGYSGGN GVERWAAVKI QTVFKGYLAR KALRALKGLV KLQALVRGYL VRKRAAETLH SMQALFRAQT SVRSQRINRN NMLHPRHSLE RFDDSRSEVH
201: SKRISISVER ENFNNNVYDE TSPKIVEIDT YKTKSRSRRM NVAVSECGDD FIYQGKDFEW SFPGDKCKFP TAQNTPRFSS SMASNHHYYT PPSPAKSVSR
301: DVCFRPSYSG LMTPSYMANT QSFKAKVRSH SAPRQRPDRK RLSLDEIMAA RSSVSGVRMV QPQPQQEKRS SCSYDRQFPQ EPADFRFYN
101: GRASGYSGGN GVERWAAVKI QTVFKGYLAR KALRALKGLV KLQALVRGYL VRKRAAETLH SMQALFRAQT SVRSQRINRN NMLHPRHSLE RFDDSRSEVH
201: SKRISISVER ENFNNNVYDE TSPKIVEIDT YKTKSRSRRM NVAVSECGDD FIYQGKDFEW SFPGDKCKFP TAQNTPRFSS SMASNHHYYT PPSPAKSVSR
301: DVCFRPSYSG LMTPSYMANT QSFKAKVRSH SAPRQRPDRK RLSLDEIMAA RSSVSGVRMV QPQPQQEKRS SCSYDRQFPQ EPADFRFYN
001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN
Arabidopsis Description
IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.