Factsheet for GSMUA_Achr8P20170_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	60.75	64.12
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	63.0	62.07
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	55.25	58.62
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	51.5	54.93
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	49.75	49.26
KRH48993	Soybean	plastid	11.25	47.87
GSMUA_Achr10P...	Banana	cytosol	52.0	47.17
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	42.5	46.07
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	46.25	46.02
VIT_11s0016g03030.t01	Wine grape	cytosol	47.5	43.68
KRH47199	Soybean	cytosol	42.75	43.18
Solyc06g066430.2.1	Tomato	nucleus	41.75	42.6
TraesCS1B01G142100.1	Wheat	cytosol	48.25	42.51
TraesCS1D01G123800.1	Wheat	cytosol	48.0	42.29
TraesCS1A01G122900.1	Wheat	cytosol, plastid	47.75	42.07
Os01t0190500-01	Rice	cytosol, mitochondrion	48.5	41.72
KRH44268	Soybean	cytosol	41.75	41.54
Os05t0187500-01	Rice	cytosol	48.75	41.49
Zm00001d037688_P001	Maize	mitochondrion	47.25	40.91
PGSC0003DMT400042595	Potato	nucleus	15.5	40.79
KRH60203	Soybean	cytosol, mitochondrion	36.25	40.28
TraesCS3B01G127100.1	Wheat	cytosol	46.25	39.96
KRH41488	Soybean	cytosol, mitochondrion	43.25	39.68
Zm00001d010366_P001	Maize	cytosol, mitochondrion	46.5	39.66
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	45.5	39.48
KXG21487	Sorghum	cytosol, mitochondrion	48.5	39.35
KRH74242	Soybean	cytosol, mitochondrion	41.25	39.29
TraesCS3A01G108100.1	Wheat	cytosol, mitochondrion	45.75	39.19
GSMUA_Achr4P21190_001	Banana	cytosol	19.25	38.31
Bra001633.1-P	Field mustard	cytosol	35.5	38.07
Zm00001d039510_P001	Maize	cytosol, mitochondrion	45.75	38.05
EES02320	Sorghum	mitochondrion	45.5	37.92
CDX82400	Canola	cytosol	35.25	37.8
CDY68636	Canola	cytosol	36.75	37.79
Bra021181.1-P	Field mustard	cytosol	36.75	37.79
CDX75883	Canola	cytosol	35.25	37.6
PGSC0003DMT400000953	Potato	cytosol	34.0	37.36
AT3G16490.1	Thale cress	cytosol	36.25	37.28
CDY43103	Canola	cytosol	34.0	36.96
Solyc12g008520.1.1	Tomato	cytosol	37.75	36.92
Bra014304.1-P	Field mustard	cytosol, mitochondrion	26.75	36.9
CDY46537	Canola	cytosol, mitochondrion	26.75	36.9
Zm00001d008819_P001	Maize	mitochondrion	42.75	36.7
CDY67178	Canola	cytosol, mitochondrion	35.5	36.6
CDY53440	Canola	mitochondrion	26.5	36.55
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	30.75	36.28
Bra022163.1-P	Field mustard	cytosol	35.0	36.18
CDX92076	Canola	cytosol	35.0	36.18
HORVU1Hr1G028250.6	Barley	mitochondrion	47.5	36.05
GSMUA_Achr9P06040_001	Banana	cytosol	33.5	34.9
KRH23382	Soybean	cytosol	33.0	34.74
CDY45643	Canola	cytosol	28.25	34.66
KRH09951	Soybean	cytosol	32.5	34.39
AT1G51960.1	Thale cress	cytosol, mitochondrion	29.75	33.9
AT4G29150.1	Thale cress	mitochondrion	33.75	33.83
Bra030407.1-P	Field mustard	cytosol	28.5	33.83
CDY30233	Canola	mitochondrion	32.5	33.51
Bra024161.1-P	Field mustard	mitochondrion	32.5	33.51
CDY47784	Canola	mitochondrion	32.5	33.51
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	33.0	33.25
GSMUA_Achr3P14930_001	Banana	cytosol	31.25	32.98
HORVU3Hr1G019630.3	Barley	endoplasmic reticulum, plastid	46.5	32.46
GSMUA_Achr1P02670_001	Banana	mitochondrion	11.5	32.17
KRH48992	Soybean	endoplasmic reticulum	27.0	31.95
GSMUA_Achr8P11920_001	Banana	cytosol	28.0	31.2
GSMUA_Achr8P26800_001	Banana	cytosol	28.25	30.21
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	29.25	26.71
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	27.75	25.87
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	5.75	25.56
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	26.5	25.06
GSMUA_Achr11P...	Banana	mitochondrion	12.25	24.62
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	28.0	24.4
GSMUA_Achr1P19900_001	Banana	cytosol	12.75	21.89
GSMUA_Achr8P19690_001	Banana	mitochondrion	14.5	21.09
GSMUA_Achr3P17450_001	Banana	nucleus	23.5	20.94
GSMUA_Achr4P30750_001	Banana	mitochondrion	11.5	17.16
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	21.75	15.7
GSMUA_Achr8P26180_001	Banana	mitochondrion	19.75	15.05
GSMUA_Achr2P15790_001	Banana	cytosol	21.5	15.01
GSMUA_AchrUn_...	Banana	mitochondrion	16.75	13.24
GSMUA_Achr3P11240_001	Banana	nucleus	22.0	11.27
GSMUA_Achr1P06080_001	Banana	nucleus	21.0	10.78
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	21.0	9.93
GSMUA_Achr1P19910_001	Banana	nucleus	11.0	7.36

Protein Annotations

EnsemblPlants:GSMUA_Achr8P20170_001	EnsemblPlants:GSMUA_Achr8T20170_001	EnsemblPlantsGene:GSMUA_Achr8G20170_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF10	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
SUPFAM:SSF52540	UniParc:UPI000295F710	UniProt:M0TS20	MapMan:35.2	:	:

Description

Putative IQ calmodulin-binding motif family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G20170_001]

Coordinates

chr8:+:25212444..25214237

Molecular Weight (calculated)

44659.3 Da

IEP (calculated)

11.578

GRAVY (calculated)

-0.671

Length

400 amino acids

Sequence
(BLAST)

001: MGRAARWLRR LWSSSKQSKE PKDYPGHGAE DRTEKKRWSF RRSRDSGDAA PGQNASTAAA IEAAWFKSFY AESEKEQSKH AIARLAAVRI QTAFRGYLAR
101: KALRALKALV KLQALVRGFL VRKQAAATLH SMQALVRAQA AVRARRARNL LPDDGNLVPE IRRRRSLEKF ADPRGLQTSS FQNRRFSTSI DSPILARSPK
201: IVEIDRCRTK PRSARRASLP AVDPADDLPL YAFSSPLPCQ IPARISIPSR RNLQENDWCI NGEKCRLSAT AQSTPRYMNS FGNVAVTPAK SVCGAESVFR
301: PYSSVTSSPS YMANTQSSKA KVRSQGAPRH PPESAETRKR QPLGEVNLEA RANFGGIGMH KPRSQIQEAA FSFKRAVIGR LDRSSEPGKE AEREVYLRRM

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.